DRSC/TRiP Functional Genomics Resources

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Protein Alignment NHP2 and snu13b

DIOPT Version :10

Sequence 1:NP_651965.1 Gene:NHP2 / 44005 FlyBaseID:FBgn0029148 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_955829.1 Gene:snu13b / 321114 ZFINID:ZDB-GENE-030131-9670 Length:128 Species:Danio rerio


Alignment Length:122 Identity:39/122 - (31%)
Similarity:64/122 - (52%) Gaps:3/122 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 VNAIAKPMAGKKLAKKCYKLVKKAMKHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHL 101
            ||..|.|:|...|:|....||::|..:|. ||.|..:....|.:|.:...:.|.|..|::|:.||
Zfish     6 VNPKAYPLADATLSKTILDLVQQASNYKQ-LRKGANEATKTLNRGISEFIVMAADAEPLEIILHL 69

  Fly   102 PAVCEEKGIPYTYTPSRADLGAAMGVKRGTVA--LLVRQNEEYKDLYDEVKEELSAL 156
            |.:||:|.:||.:..|:..||.|.||.|..:|  :.:::..:.|.....|:..:..|
Zfish    70 PLLCEDKNVPYVFVRSKQALGRACGVSRPVIATSVTIKEGSQLKPQIQSVQMAIERL 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NHP2NP_651965.1 Ribosomal_L7Ae 51..146 CDD:426153 31/96 (32%)
snu13bNP_955829.1 SNU13 7..128 CDD:411046 38/121 (31%)

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