Protein Alignment NHP2 and Snu13

DIOPT Version :9

• Sequence 1: NP_001261849.1
• Gene: NHP2 / 44005
• FlyBaseID: FBgn0029148
• Length: 160
• Species: Drosophila melanogaster
• Sequence 2: NP_997680.1
• Gene: Snu13 / 300092
• RGDID: 1303103
• Length: 128
• Species: Rattus norvegicus
• Alignment Length: 122
• Identity: 38/122 - (31%)
• Similarity: 65/122 - (53%)
• Gaps: 3/122 - (2%)

  Fly    37 VNAIAKPMAGKKLAKKCYKLVKKAMKHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHL 101
            ||..|.|:|...|.||...||:::..:|. ||.|..:....|.:|.:...:.|.|..|::|:.||
  Rat     6 VNPKAYPLADAHLTKKLLDLVQQSCNYKQ-LRKGANEATKTLNRGISEFIVMAADAEPLEIILHL 69

  Fly   102 PAVCEEKGIPYTYTPSRADLGAAMGVKRGTVA--LLVRQNEEYKDLYDEVKEELSAL 156
            |.:||:|.:||.:..|:..||.|.||.|..:|  :.:::..:.|.....:::.:..|
  Rat    70 PLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQSIQQSIERL 126

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NHP2	NP_001261849.1	Ribosomal_L7Ae	51..146	CDD:396000	31/96 (32%)
Snu13	NP_997680.1	SNU13	7..128	CDD:411046	37/121 (31%)
		Interaction with U4 snRNA and U4atac snRNA. /evidence=ECO:0000250|UniProtKB:P55769	36..48		3/11 (27%)
		Important for U4 snRNA-binding. /evidence=ECO:0000250|UniProtKB:P55769	96..128		4/31 (13%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1358
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810