DRSC/TRiP Functional Genomics Resources

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Protein Alignment NHP2 and Rpl7a

DIOPT Version :10

Sequence 1:NP_651965.1 Gene:NHP2 / 44005 FlyBaseID:FBgn0029148 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_001107863.1 Gene:Rpl7a / 296596 RGDID:1307586 Length:266 Species:Rattus norvegicus


Alignment Length:104 Identity:29/104 - (27%)
Similarity:46/104 - (44%) Gaps:15/104 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 KHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMG 126
            |....||.|:..|.|.:...:..:.:.|.||.|::::..|||:|.:.|:||.....:|.||..:.
  Rat   131 KRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVH 195

  Fly   127 VKRGTVALLVRQNEE---------------YKDLYDEVK 150
            .|..|.....:.|.|               |.|.|||::
  Rat   196 RKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIR 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NHP2NP_651965.1 Ribosomal_L7Ae 51..146 CDD:426153 26/98 (27%)
Rpl7aNP_001107863.1 SNU13 16..266 CDD:455736 29/104 (28%)

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