DRSC/TRiP Functional Genomics Resources

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Protein Alignment NHP2 and nhp2

DIOPT Version :9

Sequence 1:NP_001261849.1 Gene:NHP2 / 44005 FlyBaseID:FBgn0029148 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_594717.1 Gene:nhp2 / 2542369 PomBaseID:SPAC1782.10c Length:154 Species:Schizosaccharomyces pombe


Alignment Length:141 Identity:61/141 - (43%)
Similarity:88/141 - (62%) Gaps:10/141 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 EESYDDKLIFVNAIAKPMAGKKLAKKCYKLVKKAMKHKTFLRNGLKDVQTRLRKGETGICIFAGD 91
            |:.||..|..:..||||:|.|||.||..|.||||.|.|..|| |:|:|...:||||.|:.|.|||
pombe    15 EDEYDSYLPALMPIAKPLAPKKLNKKMMKTVKKASKQKHILR-GVKEVVKAVRKGEKGLVILAGD 78

  Fly    92 VTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGTVALLV---------RQNEEYKDLYD 147
            ::|:|::.|:|.:||:..:||.||.|:..||.|...||.|..:::         .:.||||:.|:
pombe    79 ISPMDVISHIPVLCEDNNVPYLYTVSKELLGEASNTKRPTSCVMIVPGGKKKDMSKVEEYKESYE 143

  Fly   148 EVKEELSALNI 158
            |:.:|:.||.:
pombe   144 EIIKEVPALEV 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NHP2NP_001261849.1 Ribosomal_L7Ae 51..146 CDD:396000 44/103 (43%)
nhp2NP_594717.1 Ribosomal_L7Ae 39..133 CDD:279573 40/94 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 85 1.000 Domainoid score I2203
eggNOG 1 0.900 - - E1_COG1358
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5524
Inparanoid 1 1.050 116 1.000 Inparanoid score I1534
OMA 1 1.010 - - QHG53726
OrthoFinder 1 1.000 - - FOG0004692
OrthoInspector 1 1.000 - - oto101722
orthoMCL 1 0.900 - - OOG6_102271
Panther 1 1.100 - - LDO PTHR23105
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R810
SonicParanoid 1 1.000 - - X3297
TreeFam 1 0.960 - -
1413.860

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