DRSC/TRiP Functional Genomics Resources

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Protein Alignment NHP2 and rps-12

DIOPT Version :10

Sequence 1:NP_651965.1 Gene:NHP2 / 44005 FlyBaseID:FBgn0029148 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_498221.1 Gene:rps-12 / 175786 WormBaseID:WBGene00004481 Length:140 Species:Caenorhabditis elegans


Alignment Length:123 Identity:28/123 - (22%)
Similarity:44/123 - (35%) Gaps:18/123 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ASGDVTIKEEESYDDKLIFVNAIAKPMAGKKLAKKCYKLVKKAMKHKTFLRNGLKDVQTRLRKGE 82
            |.|||.:...           |:|:....|:.|   .:.|.:|..|...|..||.:....|.|.|
 Worm     4 AGGDVQVAPA-----------AVAQGPMDKEGA---LRAVLRAAHHADGLAKGLHETCKALDKRE 54

  Fly    83 TGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGV----KRGTVALLV 136
            ...|:.|.:......:..:..:|.|..||......:..:|...|:    |.|....:|
 Worm    55 AHFCVLAENCDEPQYVKLVETLCAEHQIPLIKVADKKIIGEYCGLCKYDKEGKARKVV 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NHP2NP_651965.1 Ribosomal_L7Ae 51..146 CDD:426153 20/90 (22%)
rps-12NP_498221.1 Ribosomal_L7Ae 25..119 CDD:426153 21/91 (23%)

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