DRSC/TRiP Functional Genomics Resources

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Protein Alignment NHP2 and RPP38

DIOPT Version :10

Sequence 1:NP_651965.1 Gene:NHP2 / 44005 FlyBaseID:FBgn0029148 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_006405.2 Gene:RPP38 / 10557 HGNCID:30329 Length:283 Species:Homo sapiens


Alignment Length:94 Identity:22/94 - (23%)
Similarity:43/94 - (45%) Gaps:7/94 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 GLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRAD-LGAAMGVKRGTVA 133
            |:.:|...|.:.|..:.:....|.|..|..||..:...:.:|....|..:: :...:|:| ..:|
Human   116 GVNEVTRALERRELLLVLVCKSVKPAMITSHLIQLSLSRSVPACQVPRLSERIAPVIGLK-CVLA 179

  Fly   134 LLVRQNEEYKDLYDEVK---EELSALNIP 159
            |..::|.  .|..|||:   ..:.:|::|
Human   180 LAFKKNT--TDFVDEVRAIIPRVPSLSVP 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NHP2NP_651965.1 Ribosomal_L7Ae 51..146 CDD:426153 17/76 (22%)
RPP38NP_006405.2 Ribosomal_L7Ae 107..185 CDD:469835 15/69 (22%)

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