DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sras and rce1b

DIOPT Version :9

Sequence 1:NP_524673.3 Gene:Sras / 44002 FlyBaseID:FBgn0029121 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_017208487.1 Gene:rce1b / 566908 ZFINID:ZDB-GENE-091204-277 Length:306 Species:Danio rerio


Alignment Length:275 Identity:124/275 - (45%)
Similarity:171/275 - (62%) Gaps:13/275 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SVSCCFVLAVLYVGSLYIWSTKHNRDHPTTVKRRFASVSMVMLAAPFFVYFFS-SPELLSRVPFP 93
            |||||.:||.|||||||:|.....||||.|:||||.||..|...||..|..:: |.:|....|..
Zfish    18 SVSCCLLLACLYVGSLYVWKGSLPRDHPNTIKRRFTSVLCVSAVAPLVVLAWTHSMKLRPSPPLW 82

  Fly    94 KLLGLRLEGLWQAVVIPYSLTVLLFLGPIFVNMQNESVRSYF--------DLDYWRGSFGSIIWV 150
            .|||:||||...|.|:|.:||::|||||: ..:..||.|..|        |...|......:.|:
Zfish    83 ALLGIRLEGFVPAAVLPLTLTMVLFLGPL-TQLAVESPRGLFHDVKAGLTDCQSWSKQVKDLKWL 146

  Fly   151 RNHVIAPLSEEFVFRACMMPLILQSFSPLVAVFITPLFFGVAHLHHIAERLSLGVELSTALLI-G 214
            ||||:|||:||||||||::|:::....|..|:||:||||||||.|||.|:|..|.:....:|| .
Zfish   147 RNHVVAPLTEEFVFRACIIPMLVPCTGPTSAIFISPLFFGVAHFHHIIEQLRFGQDTVFDILICA 211

  Fly   215 LFQFIYTTLFGFYSAFLFARTGHVMAPILVHAFCNHMGLPDLQDLWQQDLWRRVVAIILYLAGFV 279
            .|||.||::||.|:||:|.||||::.|:|.|:|||.||.|.:..:.:..  ::.:.::.|..|.:
Zfish   212 AFQFTYTSVFGVYTAFIFIRTGHLVGPVLCHSFCNRMGFPAIGSVLEHP--QKSLILLFYQLGVL 274

  Fly   280 GWMFLVPLATDPSIY 294
            .:..|:...|||:.|
Zfish   275 LFFILLFPFTDPTFY 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrasNP_524673.3 YdiL <72..253 CDD:224185 88/190 (46%)
Abi 147..249 CDD:280650 56/102 (55%)
rce1bXP_017208487.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581796
Domainoid 1 1.000 133 1.000 Domainoid score I5013
eggNOG 1 0.900 - - E1_KOG4130
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 233 1.000 Inparanoid score I3386
OMA 1 1.010 - - QHG58442
OrthoDB 1 1.010 - - D1607650at2759
OrthoFinder 1 1.000 - - FOG0003941
OrthoInspector 1 1.000 - - otm25611
orthoMCL 1 0.900 - - OOG6_103186
Panther 1 1.100 - - O PTHR13046
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3240
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.770

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