DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sras and rce1a

DIOPT Version :10

Sequence 1:NP_524673.3 Gene:Sras / 44002 FlyBaseID:FBgn0029121 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_001919229.3 Gene:rce1a / 557720 ZFINID:ZDB-GENE-041008-116 Length:321 Species:Danio rerio


Alignment Length:304 Identity:120/304 - (39%)
Similarity:173/304 - (56%) Gaps:34/304 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EVTMQENVVHESLPQIPVATSVSCCFVLAVLYVGSLYIWSTKHNRDHPTTVKRRFASVSMVMLAA 74
            ::|:..||.  |:|......|:..|.:||..||||||:|.:...||||..:||||.||.:|...:
Zfish    15 QLTLHANVA--SVPDGLCWVSILSCLLLACSYVGSLYVWKSDLPRDHPAVIKRRFTSVLIVSALS 77

  Fly    75 PFFVYFFS-------SPELLSRVPFPKLLGLRLEGLWQAVVIPYSLTVLLFLGPI---------- 122
            |.||:.:.       .|.|.:      |:|:|||||..|:::|..||::|||||:          
Zfish    78 PVFVWAWKDFTGIQPGPSLFA------LMGIRLEGLIPAIILPLLLTMVLFLGPLIQLAMDCPWG 136

  Fly   123 FVNMQNESVRSYFDLDYWRGSFGSIIWVRNHVIAPLSEEFVFRACMMPLILQSFSPLVAVFITPL 187
            |:    :.::...|..:|......:.|:||.|:|||:||.||||||:|:::....|..|:|..||
Zfish   137 FI----DGMKVVVDPCFWSLCLSDMRWLRNQVVAPLTEELVFRACMLPMLVPCAGPSTAIFTCPL 197

  Fly   188 FFGVAHLHHIAE--RLSLGVELSTALLIGLFQFIYTTLFGFYSAFLFARTGHVMAPILVHAFCNH 250
            ||||||.||:.|  |...|. :|...|..:|||.||.:||.|:||:|.||||::.|:|.|:|||:
Zfish   198 FFGVAHFHHVIELLRFRQGT-VSGIFLSAVFQFSYTAVFGAYTAFIFIRTGHLVGPVLCHSFCNY 261

  Fly   251 MGLPDLQDLWQQDLWRRVVAIILYLAGFVGWMFLVPLATDPSIY 294
            ||.|.|..  ..|..:|:..:..|..|.|.::.|:...|||..|
Zfish   262 MGFPALNT--ALDHSQRLTILFFYGLGVVLFLLLIFPMTDPHFY 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrasNP_524673.3 Rce1-like 147..249 CDD:460578 53/103 (51%)
rce1aXP_001919229.3 Rce1-like 159..262 CDD:460578 55/103 (53%)

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