DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sras and Rce1

DIOPT Version :9

Sequence 1:NP_524673.3 Gene:Sras / 44002 FlyBaseID:FBgn0029121 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_006230850.1 Gene:Rce1 / 309153 RGDID:1309261 Length:339 Species:Rattus norvegicus


Alignment Length:247 Identity:94/247 - (38%)
Similarity:128/247 - (51%) Gaps:26/247 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKNLSETEAEVTMQENVVHESLPQIPVATSVSCCFVLAVLYVGSLYIWSTKHNRDHPTTVKRRFA 65
            ::.||.:..|...:...:....|.:....||..||.||..||||||:|.::..||||..:||||.
  Rat     9 LRLLSVSRPERQPESAALSSPGPGLCCWVSVFSCFSLACSYVGSLYVWKSELPRDHPAVIKRRFT 73

  Fly    66 SVSMVMLAAPFFVYFFSSPELLSRVPFPKLL---GLRLEGLWQAVVIPYSLTVLLFLGPIFVNMQ 127
            ||.:|...:|..|..:.  ||....|...||   |.||||::.|.::|..||::|||||:   ||
  Rat    74 SVLVVSSLSPLCVLLWR--ELTGIQPGTSLLTLMGFRLEGIFPAALLPLLLTMILFLGPL---MQ 133

  Fly   128 ---------NESVRSYFDLDYWRGSFGSIIWVRNHVIAPLSEEFVFRACMMPLILQSFSPLVAVF 183
                     .:.::.......|......:.|:||.|||||:||.||||||:|::........|||
  Rat   134 LCMDCPCDLTDGLKVVLAPRSWARRLTDMRWLRNQVIAPLTEELVFRACMLPMLAPCTGLGPAVF 198

  Fly   184 ITPLFFGVAHLHHIAERL-----SLG-VELSTALLIG---LFQFIYTTLFGF 226
            ..||||||||.|||.|:|     |:| :.||.|.:..   |.......|:||
  Rat   199 TCPLFFGVAHFHHIIEQLRFRQSSVGSIFLSAASVSSVPVLLHRCLRCLYGF 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SrasNP_524673.3 YdiL <72..253 CDD:224185 66/176 (38%)
Abi 147..249 CDD:280650 42/89 (47%)
Rce1XP_006230850.1 Abi 164..241 CDD:280650 39/76 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341777
Domainoid 1 1.000 83 1.000 Domainoid score I8173
eggNOG 1 0.900 - - E1_KOG4130
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3769
Inparanoid 1 1.050 161 1.000 Inparanoid score I4135
OMA 1 1.010 - - QHG58442
OrthoDB 1 1.010 - - D1607650at2759
OrthoFinder 1 1.000 - - FOG0003941
OrthoInspector 1 1.000 - - oto97554
orthoMCL 1 0.900 - - OOG6_103186
Panther 1 1.100 - - LDO PTHR13046
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3240
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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