DRSC/TRiP Functional Genomics Resources

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Protein Alignment ScsbetaG and AT2G20420

DIOPT Version :9

Sequence 1:NP_001286941.1 Gene:ScsbetaG / 44001 FlyBaseID:FBgn0029118 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_179632.1 Gene:AT2G20420 / 816561 AraportID:AT2G20420 Length:421 Species:Arabidopsis thaliana


Alignment Length:402 Identity:209/402 - (51%)
Similarity:275/402 - (68%) Gaps:12/402 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VRNLNLLEFQSKDLLQKYGVAIQQFKVLNNSKADAEVVKTFEC-----PEYVVKAQILAGGRGKG 79
            :|.||:.|:|..:|:.||||.:.:....::.:   ||.|..:.     .|.|||:||||||||.|
plant    24 LRRLNIHEYQGAELMGKYGVNVPKGVAASSLE---EVKKAIQDVFPNESELVVKSQILAGGRGLG 85

  Fly    80 TFDNGFKGGVHITTNKSEVLSLTQQMIGNRLITKQTPKSGILVNKVMVARSINITRETYLCILLD 144
            ||.:|.|||||| ..:.|...:..:|:|..|:||||...|.:|:||.:...:::..|.|..|:||
plant    86 TFKSGLKGGVHI-VKRDEAEEIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVNEMYFSIILD 149

  Fly   145 REHNGPVLIASPAGGMDIEAVAEETPEKIKTVPLDIGKPIPESTLLEVAKFLEFKGDSVKRCAEE 209
            |:..||::||...||..||.:||:.|:.|..||:|:...|.:....:|...|..|....|...|:
plant   150 RKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDAAKVVDGLAPKAADRKDSIEQ 214

  Fly   210 IQKLYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIFSM-DVTEEESDPREV 273
            ::|||.||:..|...:||||||||...::::.||||||||||.||||::|:| |.|:|  |||||
plant   215 VKKLYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQKEVFAMRDPTQE--DPREV 277

  Fly   274 EAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLDVGGGVREDQVAKAFEILTAD 338
            .|||.:|||:.:||.|||:||||||||||||||||:||.|||||||||...|.||.:||:|||:|
plant   278 AAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEHQVVEAFKILTSD 342

  Fly   339 PKVKGILVNVFGGIVNCATIANGIVAASKKLQLNVPLVVRLEGTNVNQAREILKNSGLPIQTASD 403
            .|||.||||:||||:.|..||:|||.|:|::.|.||:|||||||||.|.:.|||.||:.:.||.|
plant   343 DKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVPVVVRLEGTNVEQGKRILKESGMKLITADD 407

  Fly   404 LDDAAHKAVAAL 415
            |||||.|||.||
plant   408 LDDAAEKAVKAL 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScsbetaGNP_001286941.1 sucC 24..416 CDD:234813 207/398 (52%)
ATP-grasp_4 24..232 CDD:302634 83/212 (39%)
Ligase_CoA 292..412 CDD:278948 82/119 (69%)
AT2G20420NP_179632.1 PLN00124 1..421 CDD:177736 209/402 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 166 1.000 Domainoid score I1203
eggNOG 1 0.900 - - E1_COG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60702
OrthoDB 1 1.010 - - D973871at2759
OrthoFinder 1 1.000 - - FOG0001148
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100409
Panther 1 1.100 - - O PTHR11815
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.790

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