DRSC/TRiP Functional Genomics Resources

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Protein Alignment ScsbetaG and suclg2

DIOPT Version :9

Sequence 1:NP_001286941.1 Gene:ScsbetaG / 44001 FlyBaseID:FBgn0029118 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_012816430.1 Gene:suclg2 / 496495 XenbaseID:XB-GENE-956242 Length:431 Species:Xenopus tropicalis


Alignment Length:395 Identity:239/395 - (60%)
Similarity:304/395 - (76%) Gaps:1/395 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RNLNLLEFQSKDLLQKYGVAIQQFKVLNNSKADAEVVKTFECPEYVVKAQILAGGRGKGTFDNGF 85
            |.|||.|:|||.|:..:||.:|:|.|.:|:....:..|..:..|.|:|||||||||||||||:|.
 Frog    35 RWLNLQEYQSKKLMADHGVTVQRFFVADNANDALDAAKRLKAREIVLKAQILAGGRGKGTFDSGL 99

  Fly    86 KGGVHITTNKSEVLSLTQQMIGNRLITKQTPKSGILVNKVMVARSINITRETYLCILLDREHNGP 150
            |||||:|.:.::|..||:||||..|.||||...|:.|:|||||.:::|:|||||.||:||..|||
 Frog   100 KGGVHLTKDPNKVEELTKQMIGYNLTTKQTVAGGVKVHKVMVAEALDISRETYLAILMDRACNGP 164

  Fly   151 VLIASPAGGMDIEAVAEETPEKIKTVPLDIGKPIPESTLLEVAKFLEFKGDSVKRCAEEIQKLYT 215
            ||:.||.||||||.|||:|||.|....:||.:.|.:|..|.:|..|.|||...::.||:|::||.
 Frog   165 VLVGSPQGGMDIEEVAEKTPELIFKEEIDIFEGIKDSQALRMADNLGFKGPLQQQAAEQIKRLYH 229

  Fly   216 LFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIFSMDVTEEESDPREVEAAKYNL 280
            ||..|||.|:|:||..||.:|:|:..|||:||||||:||||:||:||.| .|:||.|.||..|:|
 Frog   230 LFLKVDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKEIFAMDDT-SETDPIENEANSYDL 293

  Fly   281 NYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLDVGGGVREDQVAKAFEILTADPKVKGIL 345
            .|:.|||||.|.||||||||||.|||.|:||:||||||:||||:|.||.:||::|||||||:.||
 Frog   294 KYIGMDGNIACFVNGAGLAMATCDIIDLHGGKPANFLDLGGGVKESQVYQAFKLLTADPKVEAIL 358

  Fly   346 VNVFGGIVNCATIANGIVAASKKLQLNVPLVVRLEGTNVNQAREILKNSGLPIQTASDLDDAAHK 410
            ||:||||||||.|||||..|.::|:|.||||||||||||::|:.||..|||||.:|:||||||.|
 Frog   359 VNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVHEAKRILAESGLPITSANDLDDAARK 423

  Fly   411 AVAAL 415
            |||::
 Frog   424 AVASI 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScsbetaGNP_001286941.1 sucC 24..416 CDD:234813 237/392 (60%)
ATP-grasp_4 24..232 CDD:302634 111/207 (54%)
Ligase_CoA 292..412 CDD:278948 86/119 (72%)
suclg2XP_012816430.1 sucC 38..430 CDD:234813 237/392 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 213 1.000 Domainoid score I2695
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 465 1.000 Inparanoid score I1508
OMA 1 1.010 - - QHG60702
OrthoDB 1 1.010 - - D342254at33208
OrthoFinder 1 1.000 - - FOG0001148
OrthoInspector 1 1.000 - - oto105373
Panther 1 1.100 - - LDO PTHR11815
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3948
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.080

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