DRSC/TRiP Functional Genomics Resources

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Protein Alignment ScsbetaG and sucla2

DIOPT Version :9

Sequence 1:NP_001286941.1 Gene:ScsbetaG / 44001 FlyBaseID:FBgn0029118 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_998191.1 Gene:sucla2 / 406299 ZFINID:ZDB-GENE-040426-1963 Length:466 Species:Danio rerio


Alignment Length:393 Identity:184/393 - (46%)
Similarity:252/393 - (64%) Gaps:3/393 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RNLNLLEFQSKDLLQKYGVAIQQFKVLNNSKADAEVVKTFECPEYVVKAQILAGGRGKGTFDNGF 85
            |.|:|.|:.|..||::.|:::....|.:.........|.....:.|:|||:||||||||||:.|.
Zfish    54 RKLSLHEYMSIGLLKEAGISVPAGMVASTPDEAYTAAKQIGSKDLVIKAQVLAGGRGKGTFEGGL 118

  Fly    86 KGGVHITTNKSEVLSLTQQMIGNRLITKQTPKSGILVNKVMVARSINITRETYLCILLDREHNGP 150
            ||||.|..:..|...::.:|||.:|.||||.::|.:.|:|.|.......||.|..|.::|.:.||
Zfish   119 KGGVRIVYSPEEARDISSKMIGKKLFTKQTGEAGRICNQVFVCERRYPRREYYFAITMERSYQGP 183

  Fly   151 VLIASPAGGMDIEAVAEETPEKIKTVPLDIGKPIPESTLLEVAKFLEFKGDSVKRCAEEIQKLYT 215
            |||.|..||::||.||.|.|:.|...|:||.:.|.....::||:.:.|....:...||.:.|||.
Zfish   184 VLIGSSQGGVNIEDVAAENPDAIVKEPIDIVEGIKMDQAIKVAEKMGFPPALINEAAENMLKLYD 248

  Fly   216 LFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIFSM-DVTEEESDPREVEAAKYN 279
            :|...||..:||||:.|...|.|:.:|||:|||.||.:|||.:|.| |.::|  |.|:.:|||.:
Zfish   249 VFIKYDASMVEINPMVEDSSGIVMCMDAKINFDSNAAYRQKKVFDMRDWSQE--DARDRQAAKAD 311

  Fly   280 LNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLDVGGGVREDQVAKAFEILTADPKVKGI 344
            |||:.:||.||||||||||||||||||||:||.||||||||||....||.:||:::|:|.||:.|
Zfish   312 LNYIGLDGTIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATAQQVTEAFKLITSDKKVQAI 376

  Fly   345 LVNVFGGIVNCATIANGIVAASKKLQLNVPLVVRLEGTNVNQAREILKNSGLPIQTASDLDDAAH 409
            |||:||||:.|..||.||:.|...|.|.:|:||||:||.|:.|:.::..|.|.|....|||:||.
Zfish   377 LVNIFGGIMRCDVIAQGIIMAVTDLDLKIPIVVRLQGTRVDDAKALIAASPLKILACDDLDEAAK 441

  Fly   410 KAV 412
            ..|
Zfish   442 MVV 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScsbetaGNP_001286941.1 sucC 24..416 CDD:234813 182/390 (47%)
ATP-grasp_4 24..232 CDD:302634 80/207 (39%)
Ligase_CoA 292..412 CDD:278948 70/119 (59%)
sucla2NP_998191.1 sucC 58..448 CDD:234813 182/389 (47%)
ATP-grasp_2 58..265 CDD:285620 80/206 (39%)
Ligase_CoA 324..444 CDD:278948 70/119 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60702
OrthoDB 1 1.010 - - D342254at33208
OrthoFinder 1 1.000 - - FOG0001148
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100409
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.730

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