DRSC/TRiP Functional Genomics Resources

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Protein Alignment ScsbetaG and ATPCL

DIOPT Version :9

Sequence 1:NP_001286941.1 Gene:ScsbetaG / 44001 FlyBaseID:FBgn0029118 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001137674.2 Gene:ATPCL / 36760 FlyBaseID:FBgn0020236 Length:1112 Species:Drosophila melanogaster


Alignment Length:428 Identity:122/428 - (28%)
Similarity:180/428 - (42%) Gaps:83/428 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LLEFQSKDLLQKY------GVAIQQFKVLNN----SKADAEVVKTFECPEYVVKAQILAGGRGKG 79
            :.|...||:|.::      |.|..:|..:|:    ||...:.......| .|.|...|...||| 
  Fly     6 ITEASGKDILNRHLNTHGAGAATCRFSTVNSTTDWSKLAVDHPWLLTTP-LVCKPDQLIKRRGK- 68

  Fly    80 TFDNGFKGGVHITTNKSEVLSLTQQMIGNRLITKQTPKSGILVNKVMVARSINI--------TRE 136
                  .|.:.:..|..:|    :|.||.||...|  |.|..|.|:   |:..|        ..|
  Fly    69 ------LGLIGVKKNFEQV----KQWIGERLNKDQ--KIGNAVGKL---RNFIIEPFVPHTDAEE 118

  Fly   137 TYLCILLDREHNGPVLIASPAGGMDIEAVAEETPEKIKTVPLDIGKPIPES-TLLEV-AKFL-EF 198
            .|:||...|.  ...::....||:||..|      ..|.|.||:  |:..| :|.:| :|.| |.
  Fly   119 MYVCIYSHRA--ADTILFYHQGGVDIGDV------DAKAVKLDV--PVNSSLSLADVKSKLLKEV 173

  Fly   199 KGDSVK-RCAEEIQKLYTLFKAVDAVQIEINPLAET-DKGEVISVDAKLNFDDNAQF--RQK--D 257
            |....| |.|:.:..|||.:..:....:|||||..| |...::.:.|||  |..|.|  |.|  :
  Fly   174 KDAGTKERIAKFVSALYTTYVDLYFTYLEINPLVVTADNLYILDLAAKL--DSTADFICRPKWGE 236

  Fly   258 I-----FSMDVTEEESDPREVEA---AKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGG--E 312
            |     |..|...||:...:::|   |...|..:..:|.|..:|.|.|.::...|.|...||  |
  Fly   237 IDYPPPFGRDAYPEEAYIADLDAKSGASLKLTILNRNGRIWTMVAGGGASVIYSDTICDLGGASE 301

  Fly   313 PANFLDVGGGVREDQV---AKA-FEILTADPK-VKGILVNVFGGIVNCATIA---NGIVAASKKL 369
            .||:.:..|...|.|.   ||. ..::|:.|| ..|.::...|||.|...:|   .||:.|.::.
  Fly   302 LANYGEYSGAPSEQQTYEYAKTILNLMTSSPKHPDGKVLITGGGIANFTNVAATFQGIITALREF 366

  Fly   370 Q-----LNVPLVVRLEGTN----VNQAREILKNSGLPI 398
            |     .||.:.||..|.|    :.:.|:.....|:|:
  Fly   367 QPKLVEHNVSIFVRRAGPNYQEGLRKMRDFGSTLGIPL 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScsbetaGNP_001286941.1 sucC 24..416 CDD:234813 122/428 (29%)
ATP-grasp_4 24..232 CDD:302634 65/228 (29%)
Ligase_CoA 292..412 CDD:278948 37/126 (29%)
ATPCLNP_001137674.2 PLN02235 1..421 CDD:177879 122/428 (29%)
ATP-grasp_4 8..208 CDD:302634 65/226 (29%)
Citrate_bind 248..423 CDD:292732 44/157 (28%)
PLN02522 503..1106 CDD:178137
CoA_binding 504..613 CDD:214881
Ligase_CoA 672..796 CDD:304578
CCL_ACL-C 868..1105 CDD:99854
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0045
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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