DRSC/TRiP Functional Genomics Resources

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Protein Alignment ScsbetaG and Suclg2

DIOPT Version :9

Sequence 1:NP_001286941.1 Gene:ScsbetaG / 44001 FlyBaseID:FBgn0029118 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001094220.1 Gene:Suclg2 / 362404 RGDID:1305008 Length:434 Species:Rattus norvegicus


Alignment Length:400 Identity:238/400 - (59%)
Similarity:303/400 - (75%) Gaps:1/400 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 HKVPVRNLNLLEFQSKDLLQKYGVAIQQFKVLNNSKADAEVVKTFECPEYVVKAQILAGGRGKGT 80
            |..|.|.|||.|:|||.|:.::||.:|:|.|.:.:|...|..|.....|.|:||||||||||||.
  Rat    33 HLTPRRWLNLQEYQSKKLMSEHGVRVQRFFVASTAKEAQEAAKRLNAKEIVLKAQILAGGRGKGV 97

  Fly    81 FDNGFKGGVHITTNKSEVLSLTQQMIGNRLITKQTPKSGILVNKVMVARSINITRETYLCILLDR 145
            ||:|.|||||:|.:...|..|.|||||..|.||||||.|:.|||||||.:::|:|||||.||:||
  Rat    98 FDSGLKGGVHLTKDPKVVGQLAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDR 162

  Fly   146 EHNGPVLIASPAGGMDIEAVAEETPEKIKTVPLDIGKPIPESTLLEVAKFLEFKGDSVKRCAEEI 210
            .||||||:.||.||:|||.||..:||.|....:||.:.|.:|....:|:.|.|.|....:.|::|
  Rat   163 SHNGPVLVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFLGSLKNQAADQI 227

  Fly   211 QKLYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIFSMDVTEEESDPREVEA 275
            :|||.||..:||.|:|:||..||.:|:|:..|||:||||||:|||||||:|| .:.|::|.|.||
  Rat   228 KKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMD-DKSENEPIENEA 291

  Fly   276 AKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLDVGGGVREDQVAKAFEILTADPK 340
            |:|:|.|:.:||||.|.||||||||||.|||.||||:||||||:||||:|.||.:||::||:|||
  Rat   292 ARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKESQVYQAFKLLTSDPK 356

  Fly   341 VKGILVNVFGGIVNCATIANGIVAASKKLQLNVPLVVRLEGTNVNQAREILKNSGLPIQTASDLD 405
            |:.||||:||||||||.|||||..|.::|:|.||||||||||||.:|:.|||:|||||.:|.||:
  Rat   357 VEAILVNIFGGIVNCAIIANGITKACQELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLE 421

  Fly   406 DAAHKAVAAL 415
            |||.||||::
  Rat   422 DAAKKAVASV 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScsbetaGNP_001286941.1 sucC 24..416 CDD:234813 234/391 (60%)
ATP-grasp_4 24..232 CDD:302634 109/207 (53%)
Ligase_CoA 292..412 CDD:278948 86/119 (72%)
Suclg2NP_001094220.1 sucC 41..422 CDD:234813 227/381 (60%)
ATP-grasp_2 41..249 CDD:285620 109/207 (53%)
Ligase_CoA 308..422 CDD:278948 82/113 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337531
Domainoid 1 1.000 203 1.000 Domainoid score I2886
eggNOG 1 0.900 - - E1_COG0045
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2854
Inparanoid 1 1.050 458 1.000 Inparanoid score I1522
OMA 1 1.010 - - QHG60702
OrthoDB 1 1.010 - - D342254at33208
OrthoFinder 1 1.000 - - FOG0001148
OrthoInspector 1 1.000 - - oto98682
orthoMCL 1 0.900 - - OOG6_100409
Panther 1 1.100 - - LDO PTHR11815
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3948
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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