DRSC/TRiP Functional Genomics Resources

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Protein Alignment ScsbetaG and lsc2

DIOPT Version :10

Sequence 1:NP_651963.1 Gene:ScsbetaG / 44001 FlyBaseID:FBgn0029118 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_588466.1 Gene:lsc2 / 2539168 PomBaseID:SPCC1620.08 Length:433 Species:Schizosaccharomyces pombe


Alignment Length:415 Identity:194/415 - (46%)
Similarity:264/415 - (63%) Gaps:23/415 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RHIVHKVP--------VRNLNLLEFQSKDLLQKYGVAIQQFKVLNNSKADAEVVKTFECPEYVVK 68
            |.::.|.|        .|||.|.|:.|.|:|:|:||.:.:.....:.:...:|.:..:..:.|||
pombe     4 RSVLRKAPRAFSPFLQKRNLALHEYISHDILRKFGVDVPRGAPARSGEEAEKVARDLKVTDLVVK 68

  Fly    69 AQILAGGRGKGTFDNGFKGGVHITTNKSEVLSLTQQMIGNRLITKQTPKSGILVNKVMVARSINI 133
            ||:||||||||.||:|.:|||....:.:|.....:||||::|||:||..:|.:.|.|.|.....|
pombe    69 AQVLAGGRGKGQFDSGLRGGVRPVYDATEARMFAEQMIGHKLITRQTGPAGKICNVVYVCERKFI 133

  Fly   134 TRETYLCILLDREHNGPVLIASPAGGMDIEAVAEETPEKIKTVPLDIGKPIPESTLL------EV 192
            .:|.|..||:|||:..|:::||..||:|||.||.|.|..|      |.:.:|.|..|      |:
pombe   134 RKEYYFAILMDRENQCPMIVASDQGGVDIETVAAENPSAI------IKRSLPNSPNLDPHIAEEL 192

  Fly   193 AKFLEFKGDSVKRCAEEIQKLYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKD 257
            ...|.|...|..:..:.|.|||.:|...||.|:||||||||...:|:.:||||||||||:||..:
pombe   193 VDKLGFSSSSKPKAVDAIVKLYKVFNDCDATQVEINPLAETTDHKVLCMDAKLNFDDNAEFRHSN 257

  Fly   258 IFSM-DVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLDVGG 321
            ||.: |:::|  ||.|..|||..||::.:|||||||||||||||||||||||:||||||||||||
pombe   258 IFVLRDISQE--DPDEARAAKVGLNFIKLDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGG 320

  Fly   322 GVREDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQLNVPLVVRLEGTNVNQ 386
            ....:.:.:||.::|.|||...|.||:|||||.|..||.|:::....|.||:|::.||:|||...
pombe   321 NANAEAIREAFSLITNDPKTTAIFVNIFGGIVRCDVIAKGLISVVSALNLNIPIICRLQGTNQGA 385

  Fly   387 AREILKNSGLPIQTASDLDDAAHKA 411
            |:|::.||||.|.:..|||:||.||
pombe   386 AKEVINNSGLRIFSFDDLDEAAKKA 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScsbetaGNP_651963.1 SucC 24..416 CDD:439815 188/395 (48%)
lsc2NP_588466.1 SucC 25..423 CDD:439815 188/394 (48%)

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