DRSC/TRiP Functional Genomics Resources

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Protein Alignment ScsbetaG and sucg-1

DIOPT Version :9

Sequence 1:NP_001286941.1 Gene:ScsbetaG / 44001 FlyBaseID:FBgn0029118 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_501266.1 Gene:sucg-1 / 177555 WormBaseID:WBGene00016844 Length:415 Species:Caenorhabditis elegans


Alignment Length:414 Identity:246/414 - (59%)
Similarity:312/414 - (75%) Gaps:3/414 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLKAVTTARHIVHKVPVRNLNLLEFQSKDLLQKYGVAIQQFKVLNNSKADAEVVKTFECPEYVVK 68
            :|:|.......:.|...|.|||.|||||::|:|:|.::|.|.|.:|.|...|...:|...|||||
 Worm     1 MLRAAGNLSKSMMKSQRRFLNLQEFQSKEILEKHGCSVQNFVVASNRKEAEEKWMSFGDHEYVVK 65

  Fly    69 AQILAGGRGKGTFDNGFK--GGVHITTNKSEVLSLTQQMIGNRLITKQTPKSGILVNKVMVARSI 131
            |||||||||||.|.||.|  |||.||..|...|....:|||.||:||||...|:.|:|||:|..:
 Worm    66 AQILAGGRGKGKFINGTKGIGGVFITKEKDAALEAIDEMIGKRLVTKQTTSEGVRVDKVMIAEGV 130

  Fly   132 NITRETYLCILLDREHNGPVLIASPAGGMDIEAVAEETPEKIKTVPLDIGKPIPESTLLEVAKFL 196
            :|.|||||.:|:|||.||||::|||.||||||||||:|||:|...|:||...:.|...|::||.|
 Worm   131 DIKRETYLAVLMDRESNGPVVVASPDGGMDIEAVAEKTPERIFKTPIDIQMGMTEGQSLKIAKDL 195

  Fly   197 EFKGDSVKRCAEEIQKLYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQFRQKDIFSM 261
            :|:|..:...|:||::||.||.||||.|:|||||.||..|.|..||||:||||:|.:|||:||:.
 Worm   196 QFEGKLIGVAAQEIKRLYDLFIAVDATQVEINPLVETADGRVFCVDAKMNFDDSAAYRQKEIFAY 260

  Fly   262 DVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEPANFLDVGGGVRED 326
            : |.||.|||||:|.::||||:.|||||.||||||||||||||:|||:||||||||||||.|.||
 Worm   261 E-TFEEHDPREVDAHQFNLNYIGMDGNIACLVNGAGLAMATMDLIKLHGGEPANFLDVGGAVTED 324

  Fly   327 QVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQLNVPLVVRLEGTNVNQAREIL 391
            .|..|..|:|:||:||.:|:|:|||||||||||||:|:|..|:.||||:|||||||||:.|::|:
 Worm   325 AVFNAVRIITSDPRVKCVLINIFGGIVNCATIANGVVSAVNKIGLNVPMVVRLEGTNVDAAKQIM 389

  Fly   392 KNSGLPIQTASDLDDAAHKAVAAL 415
            |.|||.|.||::||:||.|||::|
 Worm   390 KKSGLKILTANNLDEAAAKAVSSL 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScsbetaGNP_001286941.1 sucC 24..416 CDD:234813 241/394 (61%)
ATP-grasp_4 24..232 CDD:302634 117/209 (56%)
Ligase_CoA 292..412 CDD:278948 84/119 (71%)
sucg-1NP_501266.1 sucC 21..410 CDD:234813 238/389 (61%)
ATP-grasp_2 21..231 CDD:285620 117/209 (56%)
Ligase_CoA 290..410 CDD:278948 84/119 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157874
Domainoid 1 1.000 222 1.000 Domainoid score I1477
eggNOG 1 0.900 - - E1_COG0045
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2854
Inparanoid 1 1.050 473 1.000 Inparanoid score I827
Isobase 1 0.950 - 0 Normalized mean entropy S484
OMA 1 1.010 - - QHG60702
OrthoDB 1 1.010 - - D342254at33208
OrthoFinder 1 1.000 - - FOG0001148
OrthoInspector 1 1.000 - - oto17854
orthoMCL 1 0.900 - - OOG6_100409
Panther 1 1.100 - - LDO PTHR11815
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2824
SonicParanoid 1 1.000 - - X3948
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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