DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spt6 and EEPD1

DIOPT Version :9

Sequence 1:NP_001284936.1 Gene:Spt6 / 44000 FlyBaseID:FBgn0028982 Length:1831 Species:Drosophila melanogaster
Sequence 2:NP_085139.2 Gene:EEPD1 / 80820 HGNCID:22223 Length:569 Species:Homo sapiens


Alignment Length:546 Identity:96/546 - (17%)
Similarity:165/546 - (30%) Gaps:208/546 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1021 LVTVCHLGPRVFINCSGFIKIDTSSLGDSTEAYVEVLDGSRVHPETYEWARKMAIDAMEYDDEET 1085
            |.|...|.|||.||             .:|.|.:..:.|         .:.|||:..::: ..|.
Human   127 LATAVPLTPRVNIN-------------TATPAQLMSVRG---------LSEKMALSIVDF-RREH 168

  Fly  1086 NPAGALEEILESPERLKDLDLDAFAVELERQGFGSKSITLYDIRNELSCLYKDYRTPYTKPSAEE 1150
            .|..::|:::    |:..::. ||...:..|.|..:|                 |.|.|..:...
Human   169 GPFRSVEDLV----RMDGINA-AFLDRIRHQVFAERS-----------------RPPSTHTNGGL 211

  Fly  1151 LFDMLTKETPDSFYVGKCVTAMVTGFTYRRPQGDQLD--SANPVRLDSNE-SWQCPFCHKDDFPE 1212
            .|......:|.|..:                |.:.||  ...|.::.|.. |.:.....:|..|.
Human   212 TFTAKPHPSPTSLSL----------------QSEDLDLPPGGPTQIISTRPSVEAFGGTRDGRPV 260

  Fly  1213 LS-EVWNHFDANACPGQPSGVR-----VRLENGLPGFIHIKNLSDRQVRNPEERVRVSQMIHVRI 1271
            |. ..||....:.......|||     ..|||.:. .:.::.|.||:.                 
Human   261 LRLATWNLQGCSVEKANNPGVREVVCMTLLENSIK-LLAVQELLDREA----------------- 307

  Fly  1272 IKIDIDRFSVECSSRTADLKDVNNEWRPRRDNYYDYVTEEQDNRKVSDAKARALKRKIYARRVIA 1336
                :::|..|.:..|  |.:: .:|:..|..:...|.|:..::....|                
Human   308 ----LEKFCTELNQPT--LPNI-RKWKGPRGCWKAVVAEKPSSQLQKGA---------------- 349

  Fly  1337 HPSFFNKSYA----EVVAMLAEADQGEVALRPSSKSKDHLTATWKVADDIFQHIDVREEGKENDF 1397
                   .||    :..|.:...|.|.   :.||.|..|                    ||    
Human   350 -------GYAGFLWDAAAGMELRDAGS---QESSPSNGH--------------------GK---- 380

  Fly  1398 SLGRSLWIGTEEFEDLD-EIIARHIMPMALAARE-----------LIQY--------KYYKPNMV 1442
            ..|.|.::|..:....| .::..|:..:.|...|           |..:        |..|..::
Human   381 LAGPSPYLGRFKVGSHDLTLVNLHLAALTLLGSENPSKNHSDGHRLASFAQTLQETLKGEKDVII 445

  Fly  1443 TG------DENERDVMEKLLREEKANDPKKIHYFFTASRAMPGKFLLSYLPKTKVRHEYVTVM-- 1499
            .|      |.|:.|::.|          :|.|:...|                   |.:..:.  
Human   446 LGDFGQGPDSNDYDILRK----------EKFHHLIPA-------------------HTFTNISTK 481

  Fly  1500 -PEGYRFRGQIFDTVNSLLRWFKEHW 1524
             |:|.:....|:.: .||.:.|..||
Human   482 NPQGSKSLDNIWIS-KSLKKVFTGHW 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spt6NP_001284936.1 HTH_44 308..411 CDD:291314
RuvC_resolvase 781..935 CDD:304378
HHH_5 939..1042 CDD:304555 8/20 (40%)
DLD 1057..1159 CDD:291540 17/101 (17%)
S1 1220..1281 CDD:278972 10/65 (15%)
SH2_2 1309..1523 CDD:291307 38/246 (15%)
SH2_Nterm_SPT6_like 1336..1420 CDD:198174 15/88 (17%)
SH2_Cterm_SPT6_like 1429..1524 CDD:198182 19/122 (16%)
EEPD1NP_085139.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
ComEA <31..100 CDD:224472
HHH_3 37..95 CDD:289597
comE 69..195 CDD:213597 20/95 (21%)
HHH_3 136..195 CDD:289597 16/86 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 200..225 7/41 (17%)
MnuA_DNase1-like 261..538 CDD:197338 59/351 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 545..569
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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