| Sequence 1: | NP_001284936.1 | Gene: | Spt6 / 44000 | FlyBaseID: | FBgn0028982 | Length: | 1831 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_011245030.1 | Gene: | Srbd1 / 78586 | MGIID: | 1925836 | Length: | 995 | Species: | Mus musculus |
| Alignment Length: | 1335 | Identity: | 245/1335 - (18%) |
|---|---|---|---|
| Similarity: | 433/1335 - (32%) | Gaps: | 457/1335 - (34%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 47 LREELKDLIDDNPIEEDDGSGYDSDGVGSGKKRKKHEDDDLDDRLEDDDYDLIEENLGVKVERRK 111
Fly 112 RFKRLRRIHDNESDGEEQHVDEGLVREQIAEQLFDENDESIGHRSERSHREADDYDDVDTESDAD 176
Fly 177 DFIVDDNGRPIAEKKKKRRPI-FTDASLQEGQDIFGVDFDYDDFSKYEEDDYEDDSEGDEYDEDL 240
Fly 241 -------GVGDDTRVKKKKALKKKVVKKTIFD--IYEPSELKRGHFTDMDNEIRKTDIPERMQLR 296
Fly 297 EVPVTPVPEGSDELDLEAEWIYKYAFCKHTVSEQEKPESREKMRKPPTTVNKIKQTLEFIRNQQL 361
Fly 362 EVPFIAFYRKEYVKPELNIDDLWKVYYYDGIWCQLNERKRKLKVLFEKMRQFQLDTLCADTDQPV 426
Fly 427 PDDVRLILDSDFERLADV-QSMEELKDVHMYFLLNYSHELPRMQAEQRRKAIQE-RREAKARR-- 487
Fly 488 -QAAAAENGDDAAEAIVVPEPEDDDDPELIDYQLKQASNSSPYAVFRKAGICGFAKHFGLTPEQY 551
Fly 552 AENLRDNYQRNEITQESIGPTEL-AKQYLSP---RFMTTDEVIHAAKYVVARQLAQEPLLRKTMR 612
Fly 613 EVYFDRARINIRPTKNGMVLIDENSPVYSMKYVAKKPVS-------------DLFGDQFIKLMMA 664
Fly 665 EEEKLLEITFLEEFEGNACANGTPGDYVE---ESKALYQLDQFAKHVQEWNKLRAECVQLALQKW 726
Fly 727 VIPDLIKELRSTLHEEAQQFVLRSCTGKLYKWLKVAPYKPQLPPDFGYEEWSTLRGIRVLGLAYD 791
Fly 792 PDHSVAAFCAVTTVEGDI--SDYLRLPNILKRKNSYNLEEKAQKLADLRKLSDFIKMKKPHIVVI 854
Fly 855 --GAESRDAQNIQADIKEILHELETSEQFPPIEVE--IIDNELAKIYANSKKGESDFKEYPPLLK 915
Fly 916 QAASLARKMQDPLVEYSQLCDADDEILCLRYHP-------LQERVPREQLLEQLSLQFINRTSEV 973
Fly 974 GLDINLMVQNSRTINLLQYICGLGPRKGQALLKLLKQSNQRLENRTQLVTVCHLGPRVFINCSGF 1038
Fly 1039 IKID-----------TSSLGDSTEAYV-------------------EVLDGSRVHPETYEWARKM 1073
Fly 1074 AIDAMEYDDEETN-------------PAGALEEILESPERLKDLDLDAFAVELERQGFGSKSITL 1125
Fly 1126 YDIRNELSCLYK--------DYRTPYTKPSAEELFDMLTKETPDSFYVGKCVTAMVTGFTYRRPQ 1182
Fly 1183 GDQLDSANPVRLDSNESWQCPFCHKDDFPELSEVWNHFDANACPGQPSGVRVRLENGLPGFIHIK 1247
Fly 1248 NLSDRQVRNPEER----VRVSQMIHVRIIKIDIDR 1278 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Spt6 | NP_001284936.1 | HTH_44 | 308..411 | CDD:291314 | 16/102 (16%) |
| RuvC_resolvase | 781..935 | CDD:304378 | 36/159 (23%) | ||
| HHH_5 | 939..1042 | CDD:304555 | 29/109 (27%) | ||
| DLD | 1057..1159 | CDD:291540 | 25/122 (20%) | ||
| S1 | 1220..1281 | CDD:278972 | 12/63 (19%) | ||
| SH2_2 | 1309..1523 | CDD:291307 | |||
| SH2_Nterm_SPT6_like | 1336..1420 | CDD:198174 | |||
| SH2_Cterm_SPT6_like | 1429..1524 | CDD:198182 | |||
| Srbd1 | XP_011245030.1 | TFIIF_alpha | <9..186 | CDD:310411 | 44/248 (18%) |
| Tex | 205..992 | CDD:225094 | 192/1056 (18%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG2183 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D56990at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.820 | |||||