DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spt6 and CG31156

DIOPT Version :9

Sequence 1:NP_001284936.1 Gene:Spt6 / 44000 FlyBaseID:FBgn0028982 Length:1831 Species:Drosophila melanogaster
Sequence 2:NP_651070.3 Gene:CG31156 / 42669 FlyBaseID:FBgn0051156 Length:948 Species:Drosophila melanogaster


Alignment Length:1212 Identity:246/1212 - (20%)
Similarity:413/1212 - (34%) Gaps:370/1212 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 SERSHREADDYDDVDTESDADDFI---VDDNGRPIAEKKKKRRPIFTDASLQEGQDIFGVDFDYD 217
            |:|..|.|.....|...||:|:.:   .||:.||   ::.|.|.|...|..|             
  Fly     2 SKRPRRAASTKKIVIEISDSDEEVNLTADDDYRP---EETKSRIIDRAADAQ------------- 50

  Fly   218 DFSKYEEDDYEDDSEGDEYDEDLGVGDDTRVKKKKALKKKVVKKTIFDIYEPSELKRGHFTDMD- 281
                                        |.|.|::.....  |||..:...|.: |||.....| 
  Fly    51 ----------------------------TVVTKRQRFPTS--KKTAAEGPAPKK-KRGDKEKADE 84

  Fly   282 NEIRKTDIPERMQLREVPVT----------------PVPE----GSDELDLEAEWIYKYAFCKHT 326
            |.....:.||.: :::.|.|                |.|:    ..|:.||:            |
  Fly    85 NACPNENNPESV-VQDTPSTSNQRNGAVGTEHNSEAPAPKRKRARKDKEDLK------------T 136

  Fly   327 VSEQEKPESREKMRKPPTTVNKIKQTLEFIRNQQLEVPFIAFYRKEYVKPELNIDDLWKVYYYDG 391
            .:.:..||..:.:  |.|.|.:               |........:.|........|       
  Fly   137 AANETNPEKGDVV--PSTAVTQ---------------PNDIVASSSHNKSSTGRSSFW------- 177

  Fly   392 IWCQLNERKRKLKVLFEKMRQFQLDTLCADTDQPVPDDVRLILDSDFERLADVQSMEELKDVHMY 456
                            |:.:.:.:|.|.|:|:...|...|.|          |:..|:...:.  
  Fly   178 ----------------ERRKVWNIDELLAETESIQPQAARNI----------VKLFEDENTIP-- 214

  Fly   457 FLLNYSHELPRMQAEQR----RKAIQERREAKARRQAAAAEN--GDDAAEAIVVPEPEDDDDPEL 515
            |:..|..:|....|..|    |....|..:.:.|     |||  |....|.|:.||         
  Fly   215 FICRYRRDLVDHIAPDRLRDIRNTYTEIVDLRKR-----AENIIGKLQRENIMTPE--------- 265

  Fly   516 IDYQLKQASNS-------SPYAVFRKAGICGFAKHFGLTPEQYAE----------NLRDNY-QRN 562
            |..:|..|.::       :||....|..:...||..||  :.||:          ||.:.. :||
  Fly   266 IREELMCAKSNEELEFLYAPYKPASKGTLAERAKALGL--QVYADCLLYGSAPKVNLSEIVDRRN 328

  Fly   563 E-ITQESI---GPTELAKQYLSPRFMTTDEVIHAAKYVVARQLAQEPLLRKTMREVYFDRARINI 623
            | :..|::   |..::....:|......:|:         |:|       :.:..|:...::...
  Fly   329 EALATEALVMSGICQIIIHNISKNTNVLEEI---------RRL-------QNVHRVFLKCSKTKE 377

  Fly   624 RPTKNGMVLIDENSPVYSMKYVAKKPVSDLF-------GD-------QFIKLMMAEEEKLLEITF 674
            ..:.........:|...|.:...||..|..|       ||       |.:.:...|:.|.|.:  
  Fly   378 AKSSKSSSSSKASSSKGSNQNADKKLDSSKFENYFNFQGDVKTIKPYQMLAINRGEKHKWLSV-- 440

  Fly   675 LEEFEGNACANGTPGDYVEESKALYQLDQFAKHVQEW-------NKLRAECVQLALQKWVIPDLI 732
              :.|.|        ||::.....|..||:.....::       .|...||....||    |.:.
  Fly   441 --KIETN--------DYLKRDLMRYITDQYMNQGLQYPLRREVFTKSLEECYAKKLQ----PLMC 491

  Fly   733 KELRSTLHEEAQQFVLRSCTGKLYKWLKVAPYKPQLPPDFGYEEWSTLRGIRVLGLAYDPDHSVA 797
            :::|:.|.|:..:..:......|.:.|.::|                |:|.|:||:    |....
  Fly   492 RQIRAALKEKGTKAAIDVFAKNLKQLLLISP----------------LKGERILGI----DPGFI 536

  Fly   798 AFCAVTTVEGDISDYLRLPNILKRKNSYNLEEKAQKLADLRKLSDFIKMKKPHIVVIGAESRDAQ 862
            ..|.:..: .:.:|.|....|.......|.....|||..|  |||.      :..:||..:..| 
  Fly   537 NGCKLALI-SETADVLYTGVIYPHGAMSNKRAAEQKLVQL--LSDH------NCKIIGLGNGTA- 591

  Fly   863 NIQADIKEILHELETSEQFPP-------IEVEIIDNELAKIYANSKKGESDFKEYPPLLKQAASL 920
                 .:|..|.|  :..|..       |...|::...|.||:.|.....:|.:.....:.|.|:
  Fly   592 -----CRETEHWL--TGMFHAGVLDSRIIRYSIVNENGASIYSCSNVAAKEFPKMDTNERSAVSI 649

  Fly   921 ARKMQDPLVEYSQLCDADDEILCLRYHPLQERVPREQLLEQLSLQFINRTSEVGLDINLMVQNSR 985
            ||::.|||.||.::     |...|.....|..||.:.|...|:.......|.||:|:     |:.
  Fly   650 ARRLNDPLSEYVKI-----EPRHLGVGMYQHDVPEKILTASLNDVVSECVSYVGVDL-----NTA 704

  Fly   986 TINLLQYICGLGPRKGQALLKLLKQSNQR--LENRTQLVTVCHLGPRVFINCSGFIKIDTSSLGD 1048
            ::::|::|.||..:|.:   |:::...|:  .:.|..|::|..:|.:.|:.|:||::|:..|:|.
  Fly   705 SLSVLKHIAGLSEKKAE---KIIEHRTQKGPFKTRKDLLSVRSIGEKSFVQCAGFVRIEPRSVGG 766

  Fly  1049 STEAYVEVLDGSRVHPETYEWARKMAIDAMEYDDEETNPAGALEEILESPERLKDLDLDA--FAV 1111
            ..:   ..||.:.||||:|.....: :...:....:...|..:..|.:......:||..|  ..:
  Fly   767 QLQ---NPLDCTWVHPESYNVVESI-VGECDLKLSDVGKAAFIASIKQFASSQPNLDRIAKQHKL 827

  Fly  1112 ELERQGFGSKSITLYDIRNELSCLYKDYRTPYTKPSAEELFDM-LTKETPDSFYVGKCVTAMVTG 1175
            .:||..|     .|..::.|   |.:|||....|   ..||.. ||:  .|...:|:.||..||.
  Fly   828 PMERLEF-----LLVALQRE---LLQDYRADLDK---RPLFKQGLTR--LDDLSMGEVVTGAVTN 879

  Fly  1176 FTYRRPQGDQLDSANPVRLDSNESWQCPFCHKDDFPELSEVWNHFDANACPGQPSGVRVRLENGL 1240
            .|       |..:...|.::.|                                           
  Fly   880 VT-------QFGAFVDVGVERN------------------------------------------- 894

  Fly  1241 PGFIHIKNLSDRQVRNPEERVRVSQMIHVRIIKIDIDRFSVE 1282
             |.||..|:::.|       :.|...|...::|:|:.|..:|
  Fly   895 -GLIHNSNMNNSQ-------LSVGDRIVASVVKVDLKRRQLE 928

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spt6NP_001284936.1 HTH_44 308..411 CDD:291314 13/102 (13%)
RuvC_resolvase 781..935 CDD:304378 40/160 (25%)
HHH_5 939..1042 CDD:304555 27/104 (26%)
DLD 1057..1159 CDD:291540 26/104 (25%)
S1 1220..1281 CDD:278972 10/60 (17%)
SH2_2 1309..1523 CDD:291307
SH2_Nterm_SPT6_like 1336..1420 CDD:198174
SH2_Cterm_SPT6_like 1429..1524 CDD:198182
CG31156NP_651070.3 Tex 184..931 CDD:225094 198/930 (21%)
Tex_N 190..362 CDD:286460 45/208 (22%)
Tex_YqgF 527..653 CDD:293526 34/146 (23%)
HHH_3 697..758 CDD:289597 19/68 (28%)
S1_like 870..930 CDD:299122 20/117 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2183
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56990at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.820

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