DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spt6 and supt6h

DIOPT Version :10

Sequence 1:NP_651962.2 Gene:Spt6 / 44000 FlyBaseID:FBgn0028982 Length:1831 Species:Drosophila melanogaster
Sequence 2:NP_660094.1 Gene:supt6h / 337866 ZFINID:ZDB-GENE-030131-7949 Length:1726 Species:Danio rerio


Alignment Length:1877 Identity:864/1877 - (46%)
Similarity:1182/1877 - (62%) Gaps:201/1877 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAEFLDSEAEESEEE-EELDVNERKRLKKLKAAVSDSSEEEEDDEERLRE-ELKDLIDDNPIEED 63
            |::|::||||||||| ||.|:..:|..:.::   .|..||||:.|::... .|:.||||:.:||:
Zfish     1 MSDFIESEAEESEEEFEEKDLKPKKTQRFME---EDEEEEEENTEDQDEHGNLRGLIDDDDVEEE 62

  Fly    64 D-------GSGYDSDGVGSGKK-RKKHEDDDLDDRLEDDDYDLIEENLGVKVERR-KRFKRLRRI 119
            :       .:|.|||   ||:: |.:......||.|:|||.|||||||||||:|| |::.|::.:
Zfish    63 EEEERGEPPAGEDSD---SGEEVRHRRRKRSFDDYLDDDDLDLIEENLGVKVKRRKKKYSRVKTM 124

  Fly   120 HDNESDGEEQHVDEGLVREQIAEQLF-----DENDESIGHRSERSHREADDYDDVDTESDADDFI 179
            .|...|.:|        ::.||:::|     .|.:...|...:..|...|:.::.|.|||.||||
Zfish   125 DDEGDDDDE--------KDLIADEIFTGDGDGEGEVEDGEAVDTLHPRDDEEEEDDEESDIDDFI 181

  Fly   180 VDDNGRPIAEKKKKRRPIFTDASLQEGQDIFGVDFDYDDFSKYEEDDYEDDSEGDEYDEDLGVGD 244
            |||:|:||.:||.|:...:|||:|||.|:|||.||   ||::::.:.| |.:|.:|.|:|    |
Zfish   182 VDDDGQPITKKKGKKFSGYTDAALQEAQEIFGGDF---DFAEFDTEAY-DHAEEEEEDQD----D 238

  Fly   245 DTRVKKKKALKKKVVKKTIFDIYEPSELKRGHFTDMDNEIRKTDIPERMQLREVPVTPVPEGSDE 309
            ::..:.||..|::|.:::||:|||||||:..|.||.|||||.||:|||.|||.:||.|..:  ||
Zfish   239 ESWDRPKKQTKRRVSRRSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRAIPVKPAED--DE 301

  Fly   310 LDLEAEWIYKYAFCKHTVSEQEKPESREK------MRKPPTTVNKIKQTLEFIRNQQLEVPFIAF 368
            |:.||||||:.||...|:|.||..:..::      .||.|:|:.|||:.|.|:|||..|||||||
Zfish   302 LEEEAEWIYRNAFSTPTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQHFEVPFIAF 366

  Fly   369 YRKEYVKPELNIDDLWKVYYYDGIWCQLNERKRKLKVLFEKMRQFQLDTLCADTDQPVPDDVRLI 433
            ||||||:|||||:|||||:.:|..|.||..||:.|..||::|:.:|.:.:.||.|:|:.|..|.:
Zfish   367 YRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQRMQSYQFEQISADPDKPLADSTRPL 431

  Fly   434 LDSDFERLADVQSMEELKDVHMYFLLNYSHELPRMQ--AEQRRKAIQERREAKARRQAAAAENGD 496
            ..:|.|||.||||::||.||:.:|||.|..::|:||  |:..:|.:::.:|       .:.|:|:
Zfish   432 DTADMERLKDVQSIDELGDVYNHFLLYYGRDIPKMQNAAKGGKKKLKKIKE-------VSEEDGE 489

  Fly   497 DAAEAIVVPEPEDDDDPELIDYQLKQASNSSPYAVFRKAGICGFAKHFGLTPEQYAENLRDNYQR 561
            :|.    |.|.|::::.:..|  |||||....|::.:.||:.|.||.|||||||:.|||||:|||
Zfish   490 EAE----VEEEEEEEEQKGPD--LKQASRRDMYSICQSAGLDGLAKKFGLTPEQFGENLRDSYQR 548

  Fly   562 NEITQESIGPTELAKQYLSPRFMTTDEVIHAAKYVVARQLAQEPLLRKTMREVYFDRARINIRPT 626
            :|..|....|.||||.|:..:|.|.:.|:..|:|:||.|:|:|||:|..:|:.:.:||:|||:||
Zfish   549 HETEQFPAEPLELAKDYVCSQFNTPEAVLEGARYMVAMQIAREPLVRHVLRQTFQERAKINIKPT 613

  Fly   627 KNGMVLIDENSPVYSMKYVAKKPVSDLFGDQFIKLMMAEEEKLLEITFLEEFEGNACANGTPGD- 690
            |.|...:||....||.||:..|||.:|.||||:|:.:||||.||.|....:..|   ..|. || 
Zfish   614 KKGKKDVDEAHFAYSFKYLKNKPVKELSGDQFLKMCLAEEEGLLAIDICIDLVG---VKGY-GDQ 674

  Fly   691 -YVEESKALYQLDQFAKHVQEWNKLRAECVQLALQKWVIPDLIKELRSTLHEEAQQFVLRSCTGK 754
             |.:|.|..|..|:|:..||||||.|...::.:||:::.|.:.|||::.|..||:..:::||..|
Zfish   675 TYFDEIKQFYYRDEFSHQVQEWNKQRTLAIERSLQQFLYPQMAKELKNKLIAEAKDNIVKSCCKK 739

  Fly   755 LYKWLKVAPYKP--QLPPDFGYEEWSTLRGIRVLGLAYDPDHSVAAFCAVTTVEGDISDYLRLPN 817
            ||.|||||||:|  |:..|....:.|..:||||||:|:........||::...||::.|:||||.
Zfish   740 LYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAFASGRDTPVFCSLINGEGEVVDFLRLPY 804

  Fly   818 ILKRKNSYNLEEKAQKLADLRKLSDFIKMKKPHIVVIGAESRDAQNIQADIKEILHELETSEQFP 882
            .|||:|::..:|:.:|..|:..|..|:..||||:|.:..|:|||..:..|||..:.|||.:...|
Zfish   805 FLKRRNAWREDEREKKQQDVENLKKFLLSKKPHVVAVSGENRDAHMVMEDIKRTISELEQNSSLP 869

  Fly   883 PIEVEIIDNELAKIYANSKKGESDFKEYPPLLKQAASLARKMQDPLVEYSQLCDADDEILCLRYH 947
            .:.||::|||||.:|.||||.|:||::|||||:||.|:|||:||||||::|:|..||:||||:.|
Zfish   870 VVGVELVDNELAVLYMNSKKSEADFRDYPPLLRQAVSVARKIQDPLVEFAQVCSTDDDILCLKLH 934

  Fly   948 PLQERVPREQLLEQLSLQFINRTSEVGLDINLMVQNSRTINLLQYICGLGPRKGQALLKLLKQSN 1012
            ||||.|.:|:||..|..:||||.:|||:|:|..:.:..|.:|:|||||||||||..|||:|||:|
Zfish   935 PLQEHVVKEELLSALYCEFINRVNEVGVDVNRAIAHPYTQSLVQYICGLGPRKGSHLLKILKQNN 999

  Fly  1013 QRLENRTQLVTVCHLGPRVFINCSGFIKIDTSSLGDSTEAYVEVLDGSRVHPETYEWARKMAIDA 1077
            .||||||||||:||:||:|||||:|||||||:||||||::|:||||||||||||||||||||:||
Zfish  1000 TRLENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDA 1064

  Fly  1078 MEYDD--EETNPAGALEEILESPERLKDLDLDAFAVELERQGFGSKSITLYDIRNELSCLYKDYR 1140
            :|||:  |:.|||||||||||:|||||||||||||.||||||:|:|.|||||||.||||.|||.|
Zfish  1065 LEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLR 1129

  Fly  1141 TPYTKPSAEELFDMLTKETPDSFYVGKCVTAMVTGFTYRRPQGDQLDSANPVRLDSNESWQCPFC 1205
            .||..|:.||:|:|||||||::||:||.:|.:||...:|||||:..|.|  :|.|....||||||
Zfish  1130 APYRPPNTEEVFNMLTKETPETFYIGKLITCVVTNIAHRRPQGESYDQA--IRNDETGLWQCPFC 1192

  Fly  1206 HKDDFPELSEVWNHFDANACPGQPSGVRVRLENGLPGFIHIKNLSDRQVRNPEERVRVSQMIHVR 1270
            .:|:||||||||||||:.:||||..|||.||:|.:.|||..|.|||:.|::|||||:....:|.|
Zfish  1193 QQDNFPELSEVWNHFDSGSCPGQAIGVRTRLDNAVMGFIPTKFLSDKVVKHPEERVKPGMTVHCR 1257

  Fly  1271 IIKIDIDRFSVECSSRTADLKDVNNEWRPRRDNYYDYVTEEQDNRKVSDAKARALKRKIYARRVI 1335
            |:||||::|:|:.:.||:||.|.||||:..:|.|||:..|..|.::..:.|.:. :|..|.:|||
Zfish  1258 IMKIDIEKFNVDLTCRTSDLSDKNNEWKLPKDTYYDFDAETDDVKQEEEQKKKQ-QRTTYIKRVI 1321

  Fly  1336 AHPSFFNKSYAEVVAMLAEADQGEVALRPSSKSKDHLTATWKVADDIFQHIDVREEGKENDFSLG 1400
            |||||.|.::.:...|:...|||:|.:|||||.::|||.||||||.|:||:|||||||||.||||
Zfish  1322 AHPSFHNINFKQAEKMMESMDQGDVVIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENAFSLG 1386

  Fly  1401 RSLWIGTEEFEDLDEIIARHIMPMALAARELIQYKYYKPNMVTGDENERDVMEKLLREEKANDPK 1465
            .:|||.||||||||||.||::.|||..||:|:.:||:  :...|  .:|..||:||...|...|.
Zfish  1387 HTLWINTEEFEDLDEITARYVQPMAAFARDLLGHKYF--HECNG--GDRKKMEELLVRTKKEKPT 1447

  Fly  1466 KIHYFFTASRAMPGKFLLSYLPKTKVRHEYVTVMPEGYRFRGQIFDTVNSLLRWFKEHWLDPTAT 1530
            .|.|:.:|.|.:||||||.|.|:.|.|.||||:.|:|:|:|.|||.|||.|.||||:|:.||...
Zfish  1448 FIPYYISACRDLPGKFLLGYQPRGKPRIEYVTITPDGFRYRSQIFPTVNGLFRWFKDHYQDPVPG 1512

  Fly  1531 PASASASNLTPLHLMRPPPTISSSSQTSLGPQAPYSVTGSVTGGTPRSGISSAVGGG-------- 1587
            ...||:...||..:...|..|:.:..|......|.::|..:.     :.|::..|.|        
Zfish  1513 VTPASSRTRTPASVNATPANINIADLTRAVNSLPRNMTSQMF-----NAIAAVTGQGQNPNTTPA 1572

  Fly  1588 --GSSAYSITQSITGYGTSGSSAPGAGVSSSHYGSSSTPSFGAINTPYTPSGQTPFMTP---YTP 1647
              .||.|       || :.||||.|.|.|||.|        ....||..|.. ||.|||   ||.
Zfish  1573 QWASSQY-------GY-SGGSSAGGGGGSSSAY--------HVFATPQQPMA-TPLMTPSYSYTT 1620

  Fly  1648 HASQ----TPRYGHNVPSPSSQSSSSQRHHYGSSSGTGSTPRYHDMGGGGGGGVGGGGGSNAYSM 1708
            ...|    ||:|      |||...||..||..||    |||                ..|::...
Zfish  1621 PGQQQAMTTPQY------PSSTPQSSHGHHQHSS----STP----------------SSSSSRVR 1659

  Fly  1709 QPHHQQRAKENLDWQLANDAWARRRPQQHQSHQSYHAQQQHHHSQQQPHMGMSMNMGITMSLGRG 1773
            .|..:..:...:||....:.|.:.:             :.....|:.|.|               
Zfish  1660 TPQPKASSHTAVDWGKMAEQWLQEK-------------EAERRKQKTPRM--------------- 1696

  Fly  1774 TGGGGGGGYGSTPVNDYSTGGGHNRGMSSKASVRSTPRTNASPHSMNLGDATPLYDE 1830
                       ||            ..|....:.|||.:.|       ||||||.||
Zfish  1697 -----------TP------------RPSPSPMIESTPMSIA-------GDATPLLDE 1723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spt6NP_651962.2 HTH_44 308..410 CDD:464230 59/107 (55%)
Tex 565..1278 CDD:441786 398/718 (55%)
RuvC-like 781..935 CDD:473878 74/153 (48%)
HHH_5 939..1042 CDD:473956 67/102 (66%)
SH2_2 1312..1522 CDD:464227 111/209 (53%)
supt6hNP_660094.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..196 82/208 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..248 9/33 (27%)
HTH_44 325..410 CDD:464230 45/84 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 482..512 12/42 (29%)
Tex 556..1276 CDD:441786 401/725 (55%)
YqgF 766..922 CDD:258777 74/155 (48%)
HHH_7 926..1029 CDD:291309 67/102 (66%)
SH2_2 1313..1503 CDD:464227 108/193 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1611..1726 44/197 (22%)

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