DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trbl and Stk40

DIOPT Version :9

Sequence 1:NP_524672.1 Gene:trbl / 43999 FlyBaseID:FBgn0028978 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_001139299.1 Gene:Stk40 / 74178 MGIID:1921428 Length:449 Species:Mus musculus


Alignment Length:273 Identity:74/273 - (27%)
Similarity:120/273 - (43%) Gaps:64/273 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 NLHTYIRHAKRLCETEARAIFHQICQTVQVCHRNGIILRDLKLKRFYFIDEARTKLQYESLEGSM 289
            ||..|:...|||.|.|...||:.:.:.|:..|:..|:.|||||                   |:|
Mouse   172 NLQHYVIKEKRLSERETVVIFYDVVRVVEALHQKNIVHRDLKL-------------------GNM 217

  Fly   290 ILD------------------GEDDTLSDKIGCPLYTAPELLCPQQTYKGKPADMWSLGVILYTM 336
            :|:                  .|.|.|.|:.|.|.|.:|::| ..:.|:|||:|||:|||:|:||
Mouse   218 VLNKRTHRITITNFCLGKHLVSEGDLLKDQRGSPAYISPDVL-SGRPYRGKPSDMWALGVVLFTM 281

  Fly   337 LVGQYPFYEKANCNLITVIRHGNVQIPL--TLSKSVRWLLLSLLRKDYTERMTASHI------FL 393
            |.||:|||:.....|...|:.....||.  .:|::...|:..||..|..:|:.|:.:      .:
Mouse   282 LYGQFPFYDSIPQELFRKIKAAEYTIPEDGRVSENTVCLIRKLLVLDPQQRLAAADVLEALSAII 346

  Fly   394 TPWLREQRPFHMYLPVDVEVAEDWSDAEEDEGTAADAMDDDEEGLCPLGDKHEYEDIGVEPLDYT 458
            ..|.....     |...::|..|..|......::.:|...:|   |   .::|:|       :|.
Mouse   347 ASWQSLSS-----LSGPLQVVPDIDDQMSSSDSSQEAKVTEE---C---SQYEFE-------NYM 393

  Fly   459 RSTLQMAQNANGL 471
            |..|.:|:..:.:
Mouse   394 RQQLLLAEEKSSI 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trblNP_524672.1 PKc_like 131..397 CDD:328722 60/197 (30%)
Stk40NP_001139299.1 STKc_SHIK 52..344 CDD:270876 60/191 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849863
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1362510at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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