DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trbl and stk40

DIOPT Version :9

Sequence 1:NP_524672.1 Gene:trbl / 43999 FlyBaseID:FBgn0028978 Length:484 Species:Drosophila melanogaster
Sequence 2:XP_021322631.1 Gene:stk40 / 564859 ZFINID:ZDB-GENE-030131-4831 Length:464 Species:Danio rerio


Alignment Length:485 Identity:120/485 - (24%)
Similarity:181/485 - (37%) Gaps:151/485 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SSSSSSSSSGMSSSQEDTVLGLFTPKKEFPNAKM--------------LQTIREKLMTPGGACDL 86
            |...:..|||.:|.       |..|.....|||.              :|:|.:.|....|..|.
Zfish    35 SERGAGESSGRASK-------LLCPGISGNNAKRAGPFVLGPRLGNSPVQSIAQCLARKDGTDDF 92

  Fly    87 LALGI---------AAEPTDQQPVK-LIQQRYLISAQPSHISAAVAAKTPASYRHLVDLTASNLR 141
            ..|.|         |.|..:::..| |:...|.:.:..|:....|       :.|          
Zfish    93 YQLKILTLEERGDTAGETQEERQGKMLLHTEYSLLSLLSNQEGVV-------HHH---------- 140

  Fly   142 CVDIFTGEQFLCRIVNE-PLHKVQRAYFQLQQHDEELRRSTIYGHPLIRPVHDIIPLTKDRTYIL 205
              .:|....  |.||.: ..:||:|.          .||..:....|.  .||.    .|:|..|
Zfish   141 --GLFQDRS--CEIVEDIEANKVRRM----------KRRICLVLDCLC--AHDF----SDKTADL 185

  Fly   206 IAPVPQERDSTGGVTGVYENLHTYIRHAKRLCETEARAIFHQICQTVQVCHRNGIILRDLKLKRF 270
            |                  ||..|:...|||.|.||..||:.:.:.|:..|:..|:.|||||   
Zfish   186 I------------------NLQHYVIKEKRLSEREAIIIFYDVVRVVEALHKKNIVHRDLKL--- 229

  Fly   271 YFIDEARTKLQYESLEGSMILD------------------GEDDTLSDKIGCPLYTAPELLCPQQ 317
                            |:|:|:                  .|:|.|.|:.|.|.|.:|::| ..:
Zfish   230 ----------------GNMVLNKRTHRITITNFCLGKHLVSEEDLLKDQRGSPAYISPDVL-SGR 277

  Fly   318 TYKGKPADMWSLGVILYTMLVGQYPFYEKANCNLITVIRHGNVQIPL--TLSKSVRWLLLSLLRK 380
            .|:|||:|||:|||:|:|||.||:|||:.....|...|:.....||.  .:|:|...|:..||..
Zfish   278 PYRGKPSDMWALGVVLFTMLYGQFPFYDSIPQELFRKIKGAEYSIPEDGRVSESTVCLIRKLLVL 342

  Fly   381 DYTERMTASHI------FLTPWLREQRPFHMYLPVDVEVAEDWSDAEEDEGTAADAMDDDEEGLC 439
            |..:|:||:.:      .:..|   |....|..|  ::|..|..|.........:|...:|    
Zfish   343 DPQQRLTATEVLESLSAIIASW---QSVSSMSGP--LQVVPDIDDQLNHPEHLQEAKVTEE---- 398

  Fly   440 PLGDKHEYEDIGVEPLDYTRSTLQMAQNAN 469
              ..::|:|       :|.|..|.:|:..|
Zfish   399 --SSQYEFE-------NYMRQQLLLAEEKN 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trblNP_524672.1 PKc_like 131..397 CDD:328722 80/292 (27%)
stk40XP_021322631.1 STKc_SHIK 68..359 CDD:270876 94/365 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595668
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1362510at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.850

Return to query results.
Submit another query.