DRSC/TRiP Functional Genomics Resources

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Protein Alignment jbug and CG5984

DIOPT Version :10

Sequence 1:NP_001261140.1 Gene:jbug / 43997 FlyBaseID:FBgn0028371 Length:2990 Species:Drosophila melanogaster
Sequence 2:NP_651548.1 Gene:CG5984 / 43281 FlyBaseID:FBgn0039500 Length:271 Species:Drosophila melanogaster


Alignment Length:266 Identity:61/266 - (22%)
Similarity:92/266 - (34%) Gaps:77/266 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  2273 LEINVLPASAGKEISVSGLGL-------------YQS---------------------------- 2296
            :.:|...||:....|.||.||             ||.                            
  Fly     8 MRLNTQAASSASACSSSGSGLEGNSPEEGGIFGRYQRTPDADAYPSESPRVYVAPELTDAGKVQL 72

  Fly  2297 --------RVGKTTSFAIDTVKRPA--REFDVVVSGPGGQAL-PVRCYQTKNGHLQAEFTINK-P 2349
                    ||.....|.|   ||..  ..|:|.|.||.||.: |||..|......|.:..::. .
  Fly    73 LHFPSGAVRVNSPLGFII---KRNGVKGNFEVRVEGPSGQPIQPVRQQQLDPERFQIDCQLDAGA 134

  Fly  2350 GQCVIEVLHQSKPLPGSPF-------TCESF--------------DSSKVSTQGVTKEPLALHSP 2393
            |...:.:...|..||.|||       ..||.              |:|:|.::|:....::|...
  Fly   135 GLYKVHIKCNSVTLPRSPFIIVAIAGATESIDGKPASSSVPISDSDASRVQSRGLGLTHVSLVER 199

  Fly  2394 NSFTVRTDNAGTAELEAFAISPSNQSIPVLISEQSDGVYNVEFVPSQPGNYKLTLMYGGETIPSS 2458
            |.|||....||:..|....:........|::.....|::.|.:....||:|.|.:.:|.:.:|.|
  Fly   200 NEFTVDCGQAGSNMLLVGVLGQRGPCEEVVVRHLGRGIHRVTYRVCDPGDYILVVKWGEQHVPGS 264

  Fly  2459 PLNFTA 2464
            |.:.:|
  Fly   265 PFSLSA 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jbugNP_001261140.1 CH_jitterbug-like_rpt1 57..166 CDD:409076
CH_jitterbug-like_rpt2 170..274 CDD:409078
CH_jitterbug-like_rpt3 275..373 CDD:409034
IG_FLMN 468..560 CDD:214720
IG_FLMN 560..648 CDD:214720
IG_FLMN 1119..1198 CDD:214720
IG_FLMN 1220..1302 CDD:214720
IG_FLMN 1310..1389 CDD:214720
IG_FLMN 1399..1480 CDD:214720
IG_FLMN 1480..1569 CDD:214720
IG_FLMN 1575..1659 CDD:214720
IG_FLMN 1661..1747 CDD:214720
IG_FLMN 1757..1837 CDD:214720
IG_FLMN 1837..1926 CDD:214720
IG_FLMN 1936..2023 CDD:214720
Filamin 2021..2111 CDD:395505
IG_FLMN 2198..2280 CDD:214720 1/6 (17%)
IG_FLMN 2285..2375 CDD:214720 34/163 (21%)
IG_FLMN 2376..2465 CDD:214720 23/89 (26%)
Filamin 2474..2555 CDD:395505
IG_FLMN 2657..2751 CDD:214720
IG_FLMN 2756..2847 CDD:214720
IG_FLMN 2850..2944 CDD:214720
CG5984NP_651548.1 Filamin 65..154 CDD:395505 24/91 (26%)
IG_FLMN 181..271 CDD:214720 23/90 (26%)
Blue background indicates that the domain is not in the aligned region.

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