DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jbug and cher

DIOPT Version :10

Sequence 1:NP_001261140.1 Gene:jbug / 43997 FlyBaseID:FBgn0028371 Length:2990 Species:Drosophila melanogaster
Sequence 2:NP_001262659.2 Gene:cher / 42066 FlyBaseID:FBgn0014141 Length:2577 Species:Drosophila melanogaster


Alignment Length:3124 Identity:666/3124 - (21%)
Similarity:1091/3124 - (34%) Gaps:932/3124 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EGTAAKGMNIRGNEDL-----------WVEIQANTFRNWVNEHLRETGMQVHDWATDFCDGTCLC 94
            ||..|.......:||:           |.:||.|||..|.||||:.....:::..||..||..|.
  Fly   159 EGQQADQYEENFDEDMEAERDLAEDAQWKKIQQNTFTRWANEHLKTIDRSINNLETDLSDGLRLI 223

  Fly    95 ALVENLQTRPLKPSWNRRPANQHHYLENATTALKSIEADHIKLVNIGNVDIVNGNIKLILGLIWS 159
            ||:|.|..:.: |.:|:||..:...|||.:.|||.::.:.||:|||.:.|||:..:||||||||:
  Fly   224 ALIEVLSQKRM-PKYNKRPTFRSQKLENVSVALKFLQDEGIKIVNIDSSDIVDCKLKLILGLIWT 287

  Fly   160 LIVRY-------------QIGRSKFPPRKLMLAWLQAALPDCRITNLTTDWNSGVNLAALLDYCQ 211
            ||:.|             |:..|...|::.:|.|:.|.:||..|.|.|.||.:|..:.||:|.|.
  Fly   288 LILHYSISMPMWDGEDDKQLNGSGHTPKQRLLNWIHAKIPDLPINNFTNDWTTGKAVGALVDACA 352

  Fly   212 PGLFPHWRSLDPSQSVRNCTQAMDLAQREFGVPKVLEPEYLASPWLDELSGMTYLSYFMKPGGPG 276
            |||.|.|...||..:|:|.::||.||.....|.::::||.|.:|.:||.|.|||||         
  Fly   353 PGLCPDWELWDPKDAVQNASEAMGLADDWLNVRQLIKPEELVNPNVDEQSMMTYLS--------- 408

  Fly   277 YNATMRWVNTQVKDPVKNFTTDWNDGRVMCEIIKGLGGSAPAPEKLSTDPFHYENNIRKAVDAGA 341
                 ::.|:::|                          ..||.:..|:|    |:|        
  Fly   409 -----QYPNSKLK--------------------------TGAPLRPKTNP----NSI-------- 430

  Fly   342 RLGVQPILTAKDMANPEVEHLGIMAYAAHLQWVPPRPPLSDLVSVY---LESTSGRVGEPTHFRI 403
                                            .|||      |..|   :|.....||.|.:|.:
  Fly   431 --------------------------------PPPR------VRAYGPGIEPIGPVVGAPANFTV 457

  Fly   404 DVMSRDISLSSVRCHVVPPSGQPGQPVRLNAHGEGVFVPERYGMHEIVVEIGEDSLGGHFFRALP 468
            :..|  ....||...:..|:|:                     :.:..|....|.          
  Fly   458 ETFS--AGKGSVDVDIQGPNGE---------------------IEKADVRFNNDK---------- 489

  Fly   469 RLLQVAPPGMAPCALGSLVEVLVNATGAPKTEDILVTAVSPTGISHNCPLKKIDEGHSAIFKPDE 533
                                   |.|                              ::..:.|..
  Fly   490 -----------------------NLT------------------------------YTVSYIPKS 501

  Fly   534 AGIWEIAITYQGRHIQGGPFTCAV----FDASGVSVHGLDGAMP----LRAHT-FEVDAR--GVG 587
            .|..::|:.:.||.|...||...|    .|||.|.|.| .|..|    ::..| |::.|:  |.|
  Fly   502 EGSHKVAVKFSGRDIPKSPFPVKVEGHAGDASKVKVTG-PGIQPNGVTIKKPTFFDILAKDAGRG 565

  Fly   588 VSGELHVDIVHDKHSLVCSVEKIVENKYRVTFMPRQNGKYRVYIYFNGYDVKGSPFIMRVGTKGR 652
            |...:.:|..:.|.|:...|.::..:.:|..::....|.:.|.:::.|..:..|||.::|     
  Fly   566 VPEVIIIDPANHKTSVAAKVRQLENDTWRCEYVTALQGLHSVNVFYAGTPIPNSPFPVKV----- 625

  Fly   653 SGKTRSSPLHDSKHRSESPSMHFVSTTNTRHNDYRNSSLSRHNTAERTNSYSPQYSPKLDTTDYH 717
                  :||.|::                   ..|.|......|..|..          |..|: 
  Fly   626 ------APLSDAR-------------------KVRASGRGLQATGVRVG----------DDADF- 654

  Fly   718 SSSSRYYKRESEENHATPPPAPPPASGSPTVKYLNSADLYTETLNGRRDSKTSNSSSTKNDYYYD 782
                :.|...:.|             |.|.|:.:....:....:..:.|..|...      :|| 
  Fly   655 ----KIYTEGAGE-------------GEPEVRVIGPGGMNQNVMQSKVDGNTYEC------HYY- 695

  Fly   783 KENELYSQRRAVTKPKLTPPREERELTSTTNTSSSSSFQQRHQQLATSTLTRSLSPIPSPTLNTR 847
                              |.:|.|.:...|...         |::|                   
  Fly   696 ------------------PTKEGRYVIMVTFAG---------QEVA------------------- 714

  Fly   848 SSEVHTHSPLTIKTSNQYESSTRNITSSPRHASVSPVQRYSPNSAYITTATHRMGSPLTSPVSKN 912
                  .||..:|...:.|||               :..|.|.              |:|.|.  
  Fly   715 ------KSPFEVKVGPKKESS---------------IVAYGPG--------------LSSGVI-- 742

  Fly   913 GYESSRTVEKSSTYKSTSNYVTDSNIRASPSLYGTAERLRRTGSPEPRIDHSSNVRVSSMKPASA 977
            ||.::..||.:.                            .||:          :..:...|:.|
  Fly   743 GYPAAFVVETNG----------------------------ETGA----------LGFTVAGPSQA 769

  Fly   978 RRDSWDVINKTKHMLSHNSLESLANMTEKQLNTELQYNRPDLDHETHRNTQYNKFALHKQQQQQS 1042
                                                      :.|.|.|                
  Fly   770 ------------------------------------------EIECHDN---------------- 776

  Fly  1043 DYRRDSPDDGE---RYKPSAITVKSHSNNTYTDKSGGYTKTVKESSEHVVTESNGHGPSPGYGYS 1104
                   .||.   :|.|:|                     |.|.:.|::.::.....|| :...
  Fly   777 -------GDGSALVKYHPTA---------------------VGEYAVHILCDNEDIPKSP-FIAQ 812

  Fly  1105 SLSR--FRPIDGNATGARAIRVQDIPNG-SIGRPVEFEIDGSRAGSGNLEILVN---GGRVTSSV 1163
            .|.|  |.|....|:|....:     || :|.:|..|.:|.|:||:..|:::|.   |.::...:
  Fly   813 ILPRTDFHPELVKASGPGLEK-----NGVTINQPTSFTVDPSKAGNAPLDVVVQDVFGTKLPVEL 872

  Fly  1164 RSLGGQRFIASFTPHEHGTHTVQITFNGETVPGSPWHAEI---MSSPGLTALGESTRL-VPANTP 1224
            ::........::||.....|||::.:.|.:.|.||....:   :.:..:.|.|...:. |..|..
  Fly   873 KNNPDGTKKVTYTPTSGVPHTVEVNYGGVSTPNSPHRVYVGVPVDAAKVQAFGPWLQPGVRPNAA 937

  Fly  1225 AVFEILPPPGQSLSKGECVATVLTPSKSKLNARVTHEAA------------NGAARIEFVPTEVG 1277
            ..|.:     .:...|:          ::|..::.||..            :....:|.:|...|
  Fly   938 THFNV-----DAREAGD----------AELKVKIIHEETKIEVPCRIIDNEDNTYSVEVIPPSKG 987

  Fly  1278 THVIDASINGTKIAGGPLIAKVYDSSLIQVT--EVNG----GVVGQACQFRVDASAAGEGQLEIS 1336
            .:....:..|.::   ||..||.....:.|:  :|:|    ..:....|||:......:..|.::
  Fly   988 AYTTTMTYGGQRV---PLGEKVVVEQTVDVSKIKVDGLEPTAPLNSLQQFRIITHGLPKADLAVT 1049

  Fly  1337 INE---GEVPNHVQVVGGGRCLVSFTPEQAKSHLIDIKFNGETVRGCPF--VCAV-ADTSRVLLN 1395
            |..   ..:..|:.....| .||:|||.|...:|:.|.|.|..:...||  .|.. :|:::|...
  Fly  1050 ITSPSGNRIKAHIIPTAEG-FLVNFTPTQLGEYLLSICFGGTPITPRPFRLQCLTGSDSNKVQAF 1113

  Fly  1396 LSNLELIPVNRPSSFHITVSGGGAAELAVSVRGP-QGELPVRVTGDIHAGFTAEFTPTTVGGHSI 1459
            ...||...|.:|:.|.|...|.|...|.|:|.|| :..:..|..||  ......:.||..|.:::
  Fly  1114 GPGLERGIVGQPAEFMIDTRGAGQGGLGVTVEGPCEAAINCRDNGD--GTCNVAYLPTEAGDYTV 1176

  Fly  1460 NVEYNGFAVQGTPFL-----AKSYDASKVV-VGSVSRGT-MGRPVQFTVDAGDAG----EGNLEI 1513
            |:.:|...:.|:||.     ..:...::|. :|....|. |.....|.||....|    .|.|..
  Fly  1177 NITFNERHITGSPFQPLIVPVPNLKNTRVSGIGIQPHGVIMNAATDFMVDMSKVGSNIDSGKLSC 1241

  Fly  1514 TI-SAKGQNIPTQVHPQGSAR--FSVSFVPTESCEHTINVSFNKMPVPGCPITVSISGGVAGPQV 1575
            .| ...|..:|::: .||...  |.:.:.|.|:..|||.:.::.:||||.|..|::..|....:.
  Fly  1242 AIFDPMGHVLPSKI-VQGPTDDIFRIMYTPFEAGRHTIELMYDNIPVPGSPFVVNVKSGCDPARC 1305

  Fly  1576 SLGGP----GPVHQTNSFVINHNGGRLEDIEVNVEGPAGQSVPAQVHQSADGVFKAEFVPRVVGE 1636
            ...||    |..:|.|.|.:...|.....:.:.:|||:...:...  .:.||....:::....||
  Fly  1306 KAYGPGLEKGLTNQKNKFTVETKGAGNGGLSLAIEGPSEAKMTCT--DNRDGSCDVDYLATDPGE 1368

  Fly  1637 HRVNVTVNGLPTAGSPYAAKV---YDVSAIKV--KNVSSGTVGKAVT--FLVETSQAGPGNLEVT 1694
            :.:.:........|||:...|   .|.|.:||  ..:..|.|.::|.  |.|:..:||||.:.|.
  Fly  1369 YDITIRFADKHIPGSPFRVLVEETVDPSKVKVYGPGIEHGQVRESVPTFFNVDVGEAGPGRIAVK 1433

  Fly  1695 V-NGGRVPTS---AQAQGQHTYAISFTPREAES-HTVELRFNSQDVPGSPFTCRV-----AAAAR 1749
            : |...:|..   .:.:|...||:.:.|.:|.| .|.:::|:..:||.|||...|     ....:
  Fly  1434 LTNSEGIPVDNLRVEDKGNCIYAVHYVPPKAGSVLTCQVKFSEVEVPCSPFVMTVFPKSEPTKVK 1498

  Fly  1750 IQSPETMDKVSVGRLFEFVVESDTKP------TVEVLGPARRSVPVKIDALGSSTLGYNVKFEPM 1808
            ::......|.......||  |.|||.      .|.:..|..:::..:::.:.:.|  |.|.|.|.
  Fly  1499 VKGVNEKKKTPASLPAEF--EIDTKQAGQADINVAIKNPKGKAMQPRLEEVSTGT--YVVSFVPD 1559

  Fly  1809 EVGDHSVEVRLPGGGHVEGSPFLLKAY---SAEKVIVTDIRAGVVNKSVS---FGINASQAGAGN 1867
            |.|.:...::. |...:|||||.|:|:   .|:|..:.: :|..:..|.|   ..::|.:||.|.
  Fly  1560 ECGTYQCSIKY-GDKEIEGSPFKLEAFPTGEAKKCKLVE-QAPKIQTSGSQSHLKVDAREAGDGA 1622

  Fly  1868 LEI-IVAVNGKNVPNFVQSEGNARFKVNFKPTEAATHSLSVRFNGHPVPGSPFSCHIAAAAASPS 1931
            :.. |....|..:.:....|.:..|.:.:...:...:.::|:|.|..:|...||.....:....|
  Fly  1623 VTCKITNKAGSEIVDIDVIEKDGFFDILYALNDPGDYDINVKFGGKDIPNGSFSIKAVESIEQYS 1687

  Fly  1932 MGLPRAMAMGECLKQAAVKM--------------DNTFELEGFD-------GVEPQIFVTSPSGD 1975
                    ..|.:::...|:              :.|:....|:       |......|..|||.
  Fly  1688 --------HSEYIEEHTTKVVQQTTQSELVNGKSEITYRSVAFEKLPLPTTGGNVTAEVRMPSGK 1744

  Fly  1976 NEHCQLSQHDGGSYSASFRPTTVGRHLISVTANDQHINGSPFSCNVFDVSRVSISGLEQQYGP-- 2038
            .:...:..:..|:.|..:.|...|.|.:.|..|.:.:.||||..:|..::    ||....|||  
  Fly  1745 VDKPVIQDNRDGTVSVKYDPREEGSHELVVKYNGEPVQGSPFKFHVDSIT----SGYVTAYGPGL 1805

  Fly  2039 --ANLGVPVTFSVDAAGAGEGTLELVVSTDSSTVKAEVVACAR--GLYDVTFVPQSTEPHYVNIT 2099
              ...|.|..|::...||..|.|.:.|...|   ||::.....  |...|.::|.:...:.|::.
  Fly  1806 THGVTGEPANFTISTKGASAGGLTMAVEGPS---KADINYHDNKDGTVSVQYLPTAPGEYQVSVR 1867

  Fly  2100 FNEVAVDGSPFRVDIQ---QHTQHIQIGSLAAIDFP---ADDQI----VEIFSPDQKSVPYSINR 2154
            |.:..:.|||:...|.   :....|.:||.:.:..|   .||.:    ..|.:|.....|..:.|
  Fly  1868 FGDKHIKGSPYFAKITGEGRKRNQISVGSCSEVTMPGDITDDDLRALNASIQAPSGLEEPCFLKR 1932

  Fly  2155 QTAEFRTHMTGNYTLRFIDRETRQHIGSRTLCVFDPTLVKITEVSEAFCHRPASIGVSLNEAGQG 2219
            ..       |||..:.|..||..:|:.|          ||             .:|..:|.    
  Fly  1933 MP-------TGNIGISFTPREIGEHLVS----------VK-------------RLGKHINN---- 1963

  Fly  2220 DLSALVRCGATEVPHTIRGPSKTGVYEIVYQPTRVAPHKISILFNEVPISLKPLEINVLPASAGK 2284
                                               :|.|:::...||              ...|
  Fly  1964 -----------------------------------SPFKVTVCEREV--------------GDAK 1979

  Fly  2285 EISVSGLGLYQSRVGKTTSFAIDTVKRPAREFDVVVSGPGGQALPVRCYQTKNGHLQAEFTINKP 2349
            ::.|||.||.:.:......|::||.........|.:.||  ....::|....:|.|...:...:|
  Fly  1980 KVKVSGTGLKEGQTHADNIFSVDTRNAGFGGLSVSIEGP--SKAEIQCTDKDDGTLNISYKPTEP 2042

  Fly  2350 GQCVIEVLHQSKPLPGSPFTCESFDSSKVSTQGVTKE-----------PLA-LHSPNSFTVRTDN 2402
            |..::.:......:.|||||.      ||:.:|..::           |:. :.|....|.:...
  Fly  2043 GYYIVNLKFADHHVEGSPFTV------KVAGEGSNRKREKIQRERDAVPITEIGSQCKLTFKMPG 2101

  Fly  2403 AGTAELEAFAISPSNQSIPVLISEQSDGVYNVEFVPSQPGNYKLTLMYGGETIPSSPLNFTASSS 2467
            ..:.:|.|...||||.:....|.|..||:|.|.|||.:.|.:.:::.|....||.||..||.   
  Fly  2102 ITSFDLAACVTSPSNVTEDAEIQEVEDGLYAVHFVPKELGVHTVSVRYSEMHIPGSPFQFTV--- 2163

  Fly  2468 GVRNDA-----RAAGHGLEVCHRNKEASFVVYCPIAPNVQIERLDEYGERIEPKIKALGNNEWRI 2527
            |...|:     :|.|.|||.....:.|.|.|:...|....:....|...:.:.:.|...:....:
  Fly  2164 GPLRDSGSHLVKAGGSGLERGVVGEAAEFNVWTREAGGGSLAISVEGPSKADIEFKDRKDGSCDV 2228

  Fly  2528 SYTILSVGKYEIRASCPNRGSLPGSPWHISCVESNKVTPVGGWGTLVDHDGRLILPARIIFDVEN 2592
            ||.:...|:|.:.....:| .:|.||:.:      .|:|..|                       
  Fly  2229 SYKVTEPGEYRVGLKFNDR-HIPDSPFKV------YVSPDAG----------------------- 2263

  Fly  2593 AGPGKLVCSIDGIEIPVDKLVDGKMCLNITGENLAAGEHDLDLTWSGLTITQCPRSAFVTGQQAA 2657
                      |..::.|.:...|.:                                     ||.
  Fly  2264 ----------DAHKLEVQQFPQGNI-------------------------------------QAD 2281

  Fly  2658 DKVQLMGRGLAAAQAGEAAHFTIDAS-NAPAGRPEVILTSQDNTSLPV---SLAQPR--PSENIW 2716
            ...|.|.|...|  .||     :||. .||:|       :.|:..:.|   .:...|  |.||  
  Fly  2282 APYQFMVRKNGA--KGE-----LDAKIVAPSG-------TDDDCFIQVIDGEMYSVRFYPREN-- 2330

  Fly  2717 LASYTPLKSTTGTLNLSVKWNGRLVKGCPLTVAVGSSM-DASKVIVSGEGLRHGIVGKDIKSWID 2780
                       |...:.||:||..:...|..:.||..: |.:.|..||.||.....|......|:
  Fly  2331 -----------GIHAIHVKFNGVHIPDSPFRIKVGKDVADPAAVHASGNGLDEVKTGHKADFIIN 2384

  Fly  2781 TRRAGPGELTAHCAGVRKVAY-CELYDHGDATFTLNIKPQESGRHILTIKYGGQNVPGSPFALKV 2844
            |..||.|.|.....|..|||. |...:.|   :.:...|...|.|.:|:||...::.||||.:..
  Fly  2385 TCNAGVGTLAVSIDGPSKVAMDCTEVEEG---YKVRYTPLLPGEHYITVKYNNMHIVGSPFKVNA 2446

  Fly  2845 AG------------------------------------APDASKVRVYGPGIEHGVLATFQSRFI 2873
            .|                                    ..|||||...|.|::...:.. |::|.
  Fly  2447 TGDKLADEGAQETSTVIVETVQKVAKGGKNTGVHLPTFKSDASKVVSKGMGLKKAYIGK-QNQFS 2510

  Fly  2874 CDTRGAGAGQLTVRVRGPKG---AFRVEMQRESQKDRTILCKYDPTEPGDYRVEVKWAGEFVPGS 2935
            .....||...|.|.:.||||   .|.|:....:..:    .:|...:.|.|.:.:||..|.:|||
  Fly  2511 ISATDAGNNILYVGMYGPKGPCEEFHVKHAGHNNYN----VQYLVRDRGQYVLLIKWGEEHIPGS 2571

  Fly  2936 PFPV 2939
            ||.:
  Fly  2572 PFQI 2575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jbugNP_001261140.1 CH_jitterbug-like_rpt1 57..166 CDD:409076 49/121 (40%)
CH_jitterbug-like_rpt2 170..274 CDD:409078 42/103 (41%)
CH_jitterbug-like_rpt3 275..373 CDD:409034 8/97 (8%)
IG_FLMN 468..560 CDD:214720 11/95 (12%)
IG_FLMN 560..648 CDD:214720 24/94 (26%)
IG_FLMN 1119..1198 CDD:214720 19/82 (23%)
IG_FLMN 1220..1302 CDD:214720 14/93 (15%)
IG_FLMN 1310..1389 CDD:214720 22/88 (25%)
IG_FLMN 1399..1480 CDD:214720 24/86 (28%)
IG_FLMN 1480..1569 CDD:214720 27/97 (28%)
IG_FLMN 1575..1659 CDD:214720 18/90 (20%)
IG_FLMN 1661..1747 CDD:214720 29/99 (29%)
IG_FLMN 1757..1837 CDD:214720 24/88 (27%)
IG_FLMN 1837..1926 CDD:214720 19/92 (21%)
IG_FLMN 1936..2023 CDD:214720 21/107 (20%)
Filamin 2021..2111 CDD:395505 25/95 (26%)
IG_FLMN 2198..2280 CDD:214720 6/81 (7%)
IG_FLMN 2285..2375 CDD:214720 21/89 (24%)
IG_FLMN 2376..2465 CDD:214720 29/100 (29%)
Filamin 2474..2555 CDD:395505 19/80 (24%)
IG_FLMN 2657..2751 CDD:214720 23/99 (23%)
IG_FLMN 2756..2847 CDD:214720 29/127 (23%)
IG_FLMN 2850..2944 CDD:214720 29/93 (31%)
cherNP_001262659.2 CH_dFLNA-like_rpt1 175..297 CDD:409160 49/122 (40%)
CH_dFLNA-like_rpt2 298..415 CDD:409164 45/130 (35%)
IG_FLMN 432..527 CDD:214720 28/186 (15%)
IG_FLMN 532..627 CDD:214720 25/106 (24%)
IG_FLMN 631..724 CDD:214720 24/198 (12%)
IG_FLMN 728..815 CDD:214720 28/242 (12%)
IG_FLMN 821..913 CDD:214720 24/96 (25%)
IG_FLMN 918..1001 CDD:214720 13/100 (13%)
Filamin 1012..1098 CDD:395505 21/86 (24%)
IG_FLMN 1109..1196 CDD:214720 25/88 (28%)
Filamin 1197..1293 CDD:395505 26/96 (27%)
IG_FLMN 1302..1392 CDD:214720 18/91 (20%)
IG_FLMN 1395..1490 CDD:214720 29/94 (31%)
IG_FLMN 1494..1587 CDD:214720 24/97 (25%)
IG_FLMN 1606..1682 CDD:214720 15/75 (20%)
IG_FLMN <1731..1791 CDD:214720 16/59 (27%)
IG_FLMN 1797..1884 CDD:214720 23/89 (26%)
IG_FLMN 1978..2067 CDD:214720 24/96 (25%)
Filamin <2111..2159 CDD:395505 18/47 (38%)
IG_FLMN 2172..2260 CDD:214720 20/94 (21%)
IG_FLMN 2265..2354 CDD:214720 27/152 (18%)
IG_FLMN 2360..2448 CDD:214720 28/90 (31%)
IG_FLMN 2488..2577 CDD:214720 29/93 (31%)

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