| Sequence 1: | NP_001261140.1 | Gene: | jbug / 43997 | FlyBaseID: | FBgn0028371 | Length: | 2990 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001420880.1 | Gene: | Flna / 293860 | RGDID: | 1560614 | Length: | 2647 | Species: | Rattus norvegicus |
| Alignment Length: | 3232 | Identity: | 733/3232 - (22%) |
|---|---|---|---|
| Similarity: | 1154/3232 - (35%) | Gaps: | 899/3232 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 19 HNSDGTTETQKITHAGLVARSPEGTAAKGMNIRGNEDL-----WVEIQANTFRNWVNEHLRETGM 78
Fly 79 QVHDWATDFCDGTCLCALVENLQTRPLKPSWNRRPANQHHYLENATTALKSIEADHIKLVNIGNV 143
Fly 144 DIVNGNIKLILGLIWSLIVRYQIG-----------RSKFPPRKLMLAWLQAALPDCRITNLTTDW 197
Fly 198 NSGVNLAALLDYCQPGLFPHWRSLDPSQSVRNCTQAMDLAQREFGVPKVLEPEYLASPWLDELSG 262
Fly 263 MTYLSYF----MKPG---------------GPGYNATMRWVNTQVKDPVKNFTTDWNDGRVMCEI 308
Fly 309 IKGLGGSAPAPEKLSTDPFHYENNIRKAVDAGARLGVQPILTAKDMAN--------PEV--EHLG 363
Fly 364 IMAYAAHLQWVPPRPPLSDLVSVYLESTSGRVG---------EP--------THFRIDVMSRDIS 411
Fly 412 LSSVRCHVVPPSGQPG--QPVRLNAHGEGV----FVPERYGMHEI--------------VVEIGE 456
Fly 457 DSLGGHFFRALPRLLQVAPPGMAPCALGSLVEVLVNATGAPKTEDILVTAVSPTGISHNCPLKKI 521
Fly 522 DEG-HSAIFKPDEAGIWEIAITYQGRHIQGGPFTCAVFDASGVSV-----HGLDGAMPLRAHTFE 580
Fly 581 VDARG--VGVSG---------ELHVDIVHDKHSLVCSVEKIVENKYRVTFMPRQNGKYRVYIYFN 634
Fly 635 GYDVKGSPFIM------------RVGTKG----RSGKTRSSPLH---DSKHRSESP--------S 672
Fly 673 MHFVSTT--NTRHNDYRNSSLSRH----------------NTAERTN----SYSPQ---YSPKLD 712
Fly 713 TTDYHSSSSRYYK---RESEENHATPPPAPPPASGSPTVKYLNSADLYTETLNGRRDSKTSNSSS 774
Fly 775 TKNDYYYDKENELYSQRRAVTKPKLTPPREERELTSTTNTSSSSSFQQRHQQLATSTLTRSLSPI 839
Fly 840 PSPTLNTRSSEVHTHSPLTIKTSNQYESSTRNITSSPRHASVSPVQRYSPNSAYITTATHRMGSP 904
Fly 905 LTSPVSKNGYESSRTVEKSSTYKSTSNYVTDSNIRASPSLYGTAERLRRTGSPEPRIDHSSNVRV 969
Fly 970 SSMKPASARRDSWDVINKTKHMLSHNSLESLANMTEKQLNTELQYNRPDLDHETHRNTQYNKFAL 1034
Fly 1035 HKQQQQQSDYRRDSPDDGERYKPSAITVKSHSNNTYTDK-----SGGYTKTVKESSEHVVTESNG 1094
Fly 1095 HGPSPGYGYSSLSRFRPIDGNATGARAIRVQDIPNGSIGRPVEFEIDGSRAGSGNLEILVNGGRV 1159
Fly 1160 TSSVRS-------------LGGQRFIASFTPHEHGTHTVQITFNGETVPGSPWHAEIM--SSPG- 1208
Fly 1209 LTALGESTRLVPANTPAVFEILPPPGQSLSKGECVATVLTPSKSKLNARVTHEAANGAARIEFVP 1273
Fly 1274 TEVGTHVIDASINGTKIAGGPLIAKV---YDSSLIQVT--EVNGGVVGQACQFRVDASAAGEGQL 1333
Fly 1334 EISI-NEGEVPN--HVQVVGGGRCLVSFTPEQAKSHLIDIKFNGETVRGCPFVCAV---ADTSRV 1392
Fly 1393 LLNLSNLELIPVNRPSSFHITVSG-----GGAAELAVSVRGPQGELPVRVTGDIHAG-FTAEFTP 1451
Fly 1452 TTVGGHSINVEYNGFAVQGTPF---LAKSYDASKVVV--GSVSRGTMGRPVQFTVDAGDAGEGNL 1511
Fly 1512 EITISAKGQ-NIPTQVHPQGSARFSVSFVPTESCEHTINVSFNKMPVPGCPITVSISGGVAGPQV 1575
Fly 1576 SLGGPG------PVHQTNSFVINHNGGRLEDIEVNVEGPAGQSVPAQVHQSADGVFKAEFVPRVV 1634
Fly 1635 GEHRVNVTVNGLPTAGSPYAAKV---YDVSAIKVKNVSSGTVG----KAVTFLVETSQAGPGNLE 1692
Fly 1693 VTVNG--GRVPTSAQAQGQH--TYAISFTPREAESHTVELRFNSQDVPGSPFTCRVAAAARIQSP 1753
Fly 1754 ETMDKVSVGRLFEFVVESDTKPTVEVLGPARRSVPVKIDALGSSTLGYNVKFEPMEVGDHSVEVR 1818
Fly 1819 LPGGGHVEGSPFLLKAYSAEKVIVTDIRAGVVNKSVSFGINASQAGAGNLEIIVAV-NGKNVPNF 1882
Fly 1883 VQSEGNARFKVNFKPTEAATHSLSVRFNGHPVPGSPFSCHIAAAAASPSM-------GLPRAMAM 1940
Fly 1941 GECLKQAAVK---------MDNTFELEGFDGVEPQIF--------VTSPSGDNEHCQLSQHDGGS 1988
Fly 1989 YSASFRPTTVGRHLISVTANDQHINGSPFSCNVFDVSRVSISGLEQQYGPA-NLGV---PVTFSV 2049
Fly 2050 DAAGAGEGTLELVVSTDSSTVKAEVVACA---RGLYDVTFVPQSTEPHYVNITFNEVAVDGSPF- 2110
Fly 2111 -RV--DIQQHTQHIQIGSLAAIDFPADDQIVEIFSPDQKSVPYSINRQTAEFRTHMTGNYTLRFI 2172
Fly 2173 DRETRQHIGSRTLCVFDPTLVKITEVSEAFCHRPASIGVSLNEAGQGDLSALVRCGATEVPHTIR 2237
Fly 2238 GPSKTGVYEIVYQPTRVAPHKISILFNEVPISLKPLEINVLPASAGKEISVSGLGLYQSRVGKTT 2302
Fly 2303 SFAIDTVKRPAREFDVVVSGPGGQALPVRCYQTKNGHLQAEFTINKPGQCVIEVLHQSKPLPGSP 2367
Fly 2368 FTCESFDSSKVSTQGVTKEPLA----------LHSPNSFTVRTDNAGTAELEAFAISPSNQSIPV 2422
Fly 2423 LISEQSDGVYNVEFVPSQPGNYKLTLMYGGETIPSSPLNFTAS--SSGVRNDARAAGHGLEVCHR 2485
Fly 2486 NKEASFVVYCPIAPNVQIERLDEYGERIEPKIKALGNNEWRISYTILSVGKYEIRASCPNRGSLP 2550
Fly 2551 GSPWHISCVESNKVTPVGGWGTLVDHDGRLILPARIIFDVENAGPGKLVCSIDGIEIPVDKLVDG 2615
Fly 2616 KMCLNITGENLAAGEHDLDLTWSG----LTITQCPRSAFVTGQQAADKVQLMGRGLAAAQAGEAA 2676
Fly 2677 HFTIDAS-NAPAGR-PEVILTSQDNTSLPVSLAQPRPSENIWLASYTPLKSTTGTLNLSVKWNGR 2739
Fly 2740 LVKGCPLTVAVGS---SMDASKVIVSGEGLRHGIVGKDIKSWIDTRRAGPGELTAHCAGVRKVAY 2801
Fly 2802 -CELYDHGDATFTLNIKPQESGRHILTIKYGG-QNVPGSPFALKVA------------------- 2845
Fly 2846 ----------------GAPDASKVRVYGPGIEHGVLATFQSRFICDTRGAGAGQLTVRVRGPKGA 2894
Fly 2895 FRVEMQRESQKDRTILCKYDPTEPGDYRVEVKWAGEFVPGSPFPVMI 2941 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| jbug | NP_001261140.1 | CH_jitterbug-like_rpt1 | 57..166 | CDD:409076 | 48/108 (44%) |
| CH_jitterbug-like_rpt2 | 170..274 | CDD:409078 | 50/122 (41%) | ||
| CH_jitterbug-like_rpt3 | 275..373 | CDD:409034 | 18/107 (17%) | ||
| IG_FLMN | 468..560 | CDD:214720 | 24/92 (26%) | ||
| IG_FLMN | 560..648 | CDD:214720 | 26/115 (23%) | ||
| IG_FLMN | 1119..1198 | CDD:214720 | 21/91 (23%) | ||
| IG_FLMN | 1220..1302 | CDD:214720 | 23/84 (27%) | ||
| IG_FLMN | 1310..1389 | CDD:214720 | 23/84 (27%) | ||
| IG_FLMN | 1399..1480 | CDD:214720 | 23/89 (26%) | ||
| IG_FLMN | 1480..1569 | CDD:214720 | 26/91 (29%) | ||
| IG_FLMN | 1575..1659 | CDD:214720 | 24/92 (26%) | ||
| IG_FLMN | 1661..1747 | CDD:214720 | 22/93 (24%) | ||
| IG_FLMN | 1757..1837 | CDD:214720 | 9/79 (11%) | ||
| IG_FLMN | 1837..1926 | CDD:214720 | 23/89 (26%) | ||
| IG_FLMN | 1936..2023 | CDD:214720 | 21/103 (20%) | ||
| Filamin | 2021..2111 | CDD:395505 | 32/98 (33%) | ||
| IG_FLMN | 2198..2280 | CDD:214720 | 8/81 (10%) | ||
| IG_FLMN | 2285..2375 | CDD:214720 | 22/89 (25%) | ||
| IG_FLMN | 2376..2465 | CDD:214720 | 24/98 (24%) | ||
| Filamin | 2474..2555 | CDD:395505 | 19/80 (24%) | ||
| IG_FLMN | 2657..2751 | CDD:214720 | 23/95 (24%) | ||
| IG_FLMN | 2756..2847 | CDD:214720 | 29/127 (23%) | ||
| IG_FLMN | 2850..2944 | CDD:214720 | 29/92 (32%) | ||
| Flna | NP_001420880.1 | CH_FLNA_rpt1 | 25..153 | CDD:409157 | 53/134 (40%) |
| CH_FLNA_rpt2 | 156..269 | CDD:409161 | 47/112 (42%) | ||
| IG_FLMN | 281..375 | CDD:214720 | 23/131 (18%) | ||
| IG_FLMN | 381..477 | CDD:214720 | 18/99 (18%) | ||
| IG_FLMN | 480..571 | CDD:214720 | 25/97 (26%) | ||
| IG_FLMN | 577..659 | CDD:214720 | 22/94 (23%) | ||
| IG_FLMN | 672..766 | CDD:214720 | 19/93 (20%) | ||
| IG_FLMN | 769..869 | CDD:214720 | 22/178 (12%) | ||
| IG_FLMN | 872..968 | CDD:214720 | 29/223 (13%) | ||
| IG_FLMN | 972..1064 | CDD:214720 | 26/114 (23%) | ||
| IG_FLMN | 1067..1156 | CDD:214720 | 26/94 (28%) | ||
| IG_FLMN | 1160..1252 | CDD:214720 | 24/91 (26%) | ||
| IG_FLMN | 1256..1352 | CDD:214720 | 25/95 (26%) | ||
| IG_FLMN | 1355..1442 | CDD:214720 | 26/88 (30%) | ||
| IG_FLMN | 1448..1542 | CDD:214720 | 24/93 (26%) | ||
| IG_FLMN | 1545..1639 | CDD:214720 | 23/102 (23%) | ||
| IG_FLMN | 1665..1743 | CDD:214720 | 24/118 (20%) | ||
| IG_FLMN | <1797..1861 | CDD:214720 | 14/66 (21%) | ||
| IG_FLMN | 1868..1954 | CDD:214720 | 30/89 (34%) | ||
| IG_FLMN | 2047..2136 | CDD:214720 | 25/96 (26%) | ||
| IG_FLMN | 2238..2328 | CDD:214720 | 23/124 (19%) | ||
| IG_FLMN | 2332..2423 | CDD:214720 | 30/117 (26%) | ||
| IG_FLMN | 2429..2519 | CDD:214720 | 29/92 (32%) | ||
| IG_FLMN | 2558..2646 | CDD:214720 | 28/89 (31%) |