DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jbug and TRIM2

DIOPT Version :10

Sequence 1:NP_001261140.1 Gene:jbug / 43997 FlyBaseID:FBgn0028371 Length:2990 Species:Drosophila melanogaster
Sequence 2:NP_001362417.1 Gene:TRIM2 / 23321 HGNCID:15974 Length:802 Species:Homo sapiens


Alignment Length:656 Identity:131/656 - (19%)
Similarity:209/656 - (31%) Gaps:248/656 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly  2481 EVCHRN--KEASFVVYCPIAPNVQIERLDEYGERIEPKIKALGNN-------------------E 2524
            |.|.:|  ...|..:.||:.....|  |.|.|      :.||.||                   |
Human    71 ERCLQNYIPAHSLTLSCPVCRQTSI--LPEKG------VAALQNNFFITNLMDVLQRTPGSNAEE 127

  Fly  2525 WRISYTILSV--GKYEIRASCPNRGS----------LPGSPWH---------------------- 2555
            ..|..|:.:|  ||   ..||||...          |..:||.                      
Human   128 SSILETVTAVAAGK---PLSCPNHDGNRQSFAVVPRLVSNPWPQVILPPWPSKVLGLQVMEFYCQ 189

  Fly  2556 -------ISCVES----------------------------NKVTPVGGWGTLVDHDGRLILPAR 2585
                   ..|.|.                            ||..|        :.|..|...:.
Human   190 SCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLDAVNKRLP--------EIDSALQFISE 246

  Fly  2586 IIFDVENAGPGKLVCSIDGIEIPVDKLVDGKMCLNITGENLAAGEHDLDLTWSGL--TITQCPRS 2648
            ||..:.|    :....:|.|....|:|   :..||:....|..   :|::.: ||  .:.|....
Human   247 IIHQLTN----QKASIVDDIHSTFDEL---QKTLNVRKSVLLM---ELEVNY-GLKHKVLQSQLD 300

  Fly  2649 AFVTGQQAADKVQLMGRGLAAAQAGEAAHFTIDASNAPAGRPEVILTSQDNTSLPVSLA------ 2707
            ..:.||::..               ..::||..|.| .....||:|..:..:.....||      
Human   301 TLLQGQESIK---------------SCSNFTAQALN-HGTETEVLLVKKQMSEKLNELADQDFPL 349

  Fly  2708 QPRPSENI-WLASYTPLKSTTGTLNLSVKWNGRLVKGCPLTVAVGSSMDASKVIVSGEGLRHGIV 2771
            .||.::.: ::.....||.:...|            |..||    ::..||:.:.:|||||..|:
Human   350 HPRENDQLDFIVETEGLKKSIHNL------------GTILT----TNAVASETVATGEGLRQTII 398

  Fly  2772 GKDIKSWIDTR-------RAGPGELTAHCA---GVRKVAYCELYDHGDATFTLNIKPQESGRHIL 2826
            |:.:...|.|:       :.|...|||..:   |  .||..|:.|:.:.|:......|:.|...|
Human   399 GQPMSVTITTKDKDGELCKTGNAYLTAELSTPDG--SVADGEILDNKNGTYEFLYTVQKEGDFTL 461

  Fly  2827 TIKYGGQNVPGSPFALKVAGAPDAS------KVRVYGPGIEH----------GVLATFQSR---- 2871
            :::...|::.||||.|||..:.|.|      |.||..||..|          .:.:|.:.:    
Human   462 SLRLYDQHIRGSPFKLKVIRSADVSPTTEGVKRRVKSPGSGHVKQKAVKRPASMYSTGKRKENPI 526

  Fly  2872 -----FICDTRGAGAGQLT----------------------VRVRGPKGAFR----VEMQRESQK 2905
                 |...|:|...|:.|                      |::....|.|:    :..:...|.
Human   527 EDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQL 591

  Fly  2906 DRTILCKYDPTEPGDYRV---EVKWAGEFVPGSPFPVMIFDTEEELRRYL--------QGIXGQL 2959
            .|.......|:  ||..:   :.||           |.||.::.:.:..:        :|:....
Human   592 QRPTGVAVHPS--GDIIIADYDNKW-----------VSIFSSDGKFKTKIGSGKLMGPKGVSVDR 643

  Fly  2960 NHHVIV 2965
            |.|:||
Human   644 NGHIIV 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jbugNP_001261140.1 CH_jitterbug-like_rpt1 57..166 CDD:409076
CH_jitterbug-like_rpt2 170..274 CDD:409078
CH_jitterbug-like_rpt3 275..373 CDD:409034
IG_FLMN 468..560 CDD:214720
IG_FLMN 560..648 CDD:214720
IG_FLMN 1119..1198 CDD:214720
IG_FLMN 1220..1302 CDD:214720
IG_FLMN 1310..1389 CDD:214720
IG_FLMN 1399..1480 CDD:214720
IG_FLMN 1480..1569 CDD:214720
IG_FLMN 1575..1659 CDD:214720
IG_FLMN 1661..1747 CDD:214720
IG_FLMN 1757..1837 CDD:214720
IG_FLMN 1837..1926 CDD:214720
IG_FLMN 1936..2023 CDD:214720
Filamin 2021..2111 CDD:395505
IG_FLMN 2198..2280 CDD:214720
IG_FLMN 2285..2375 CDD:214720
IG_FLMN 2376..2465 CDD:214720
Filamin 2474..2555 CDD:395505 26/106 (25%)
IG_FLMN 2657..2751 CDD:214720 17/100 (17%)
IG_FLMN 2756..2847 CDD:214720 32/100 (32%)
IG_FLMN 2850..2944 CDD:214720 26/147 (18%)
TRIM2NP_001362417.1 RAD18 33..>136 CDD:227719 17/72 (24%)
RING-HC_TRIM2 42..92 CDD:438423 6/20 (30%)
Bbox_SF 142..214 CDD:469587 9/71 (13%)
BBC 219..345 CDD:128778 30/160 (19%)
IG_FLMN 383..479 CDD:214720 30/97 (31%)
NHL_TRIM2_like 529..802 CDD:271330 23/134 (17%)
NHL repeat 547..586 CDD:271330 3/38 (8%)
NHL repeat 594..633 CDD:271330 8/51 (16%)
NHL repeat 636..673 CDD:271330 5/14 (36%)
NHL repeat 680..721 CDD:271330
NHL repeat 727..769 CDD:271330
NHL repeat 772..798 CDD:271330
Blue background indicates that the domain is not in the aligned region.

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