DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jbug and M116.5

DIOPT Version :10

Sequence 1:NP_001261140.1 Gene:jbug / 43997 FlyBaseID:FBgn0028371 Length:2990 Species:Drosophila melanogaster
Sequence 2:NP_501432.4 Gene:M116.5 / 177642 WormBaseID:WBGene00019792 Length:1020 Species:Caenorhabditis elegans


Alignment Length:1125 Identity:228/1125 - (20%)
Similarity:382/1125 - (33%) Gaps:341/1125 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RGN-EDLWVEIQANTFRNWVNEHLRETGMQVHDWATDFCDGTCLCALVENLQTRPLKPSWNRRPA 114
            ||. .|:...:|..||..|||:||.:|...:.|...|..||..|.||:|.|....::   .....
 Worm    30 RGKFNDVRDTMQKKTFTKWVNKHLTKTDHTIVDLFVDLRDGFALIALLEALTGERIQ---RENGY 91

  Fly   115 NQHHYLENATTALKSIEADHIKLVNIGNVDIVNGNIKLILGLIWSLIVRYQIG------------ 167
            .:.|.::|....|..::..:||||||...|||.||.||.|||||::|:.:|:.            
 Worm    92 TRFHRIQNVQYCLDFLKMKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQVSVIRQRLLLESSQ 156

  Fly   168 -----------------RSK-FPPRKLMLAWLQ---AALPDCRITNLTTDWNSGVNLAALLDYCQ 211
                             ||: ...|..:|.|.:   |..|...:.|.:..|..|:...|::...:
 Worm   157 HEQTNEKHTTNSQDSIHRSETTSARDALLQWAKRTTAEYPRGNVINFSNSWRDGLAFNAIIHRYR 221

  Fly   212 PGLFPHWRSLDPSQSVRNCTQAMDL----AQREFGVPKVLEPEYLASPWLDELSGMTY------- 265
            .... .|..:: |.||.| |:.:::    |.|||||.::|:.|.:.:...||.|.:||       
 Worm   222 SSAI-DWNKIN-SDSVSN-TERLNIAFAAADREFGVERLLDAEDVDTNNPDEKSIITYVSSLYNA 283

  Fly   266 ------LSYFMKPGGPGY-----------------------------NATMRWVNTQVKDPVK-- 293
                  :|.|...||...                             :.::..|:.||...::  
 Worm   284 LPQEPEMSKFAASGGKRLEEEIGKLQADADHIFEALAVISKDEALQESPSLLLVSKQVSKKIEQL 348

  Fly   294 ----NFTTDWNDGRV-MCEIIKGLGGSAPAPEKLS----------TDPFHYENNIRKAVD----- 338
                ....:..|..: .|:::....|.....::|.          :|.|...::....:|     
 Worm   349 KVLLKLVEEKKDTFISKCKLVMRTAGPESDAKELDSLMKHVEDAYSDVFELISDKEGLIDRCNAS 413

  Fly   339 -------------------AGARLGVQPILTAKDM-ANPEVEHLGIMAYAAHLQWVPPRPPLSDL 383
                               |....|...:|.|:|: .|...:...::.|.:.|:..|..|.:|.|
 Worm   414 NINSDSVPNTESLNLAFAAADPEFGAGRLLDAEDVDTNNNPDEKPVITYVSSLKNAPQDPEMSRL 478

  Fly   384 VSVYLESTSGRVG----EPTHF--RIDVMSRDISLSSVRCHVVPPSGQPGQPVRLNAHGEGVFVP 442
            .:...:.....:|    :..|.  .:.|||:|.:|..      .||        |..:.:.:...
 Worm   479 AASGGKGFEEEIGKLQADADHIFEALAVMSKDEALQE------SPS--------LLLYSKQIRFN 529

  Fly   443 ERYGMHEIV--VEIGEDSLGGHFFRALPRLLQVAPPGMAPCALGSLVEVL--------------- 490
            :...:.|::  ||..:|:    |......:::.|.|......|.||::.:               
 Worm   530 KIQKLKELLKPVEEKKDT----FISECKLVMKTAGPEADTKELDSLLKQVEDAYSDVFELISDKE 590

  Fly   491 ----------VNATGAPKTEDI---LVTAVSPTGISHNCPLKKIDEGHSAIFKPDEAGIWEIAIT 542
                      :|:.....||.:   |..|.:..|.......:.:|..::    |||..|    ||
 Worm   591 GLIDRCNASNINSDSVSNTERLNIALAAADAEFGAGRLLDAEDVDTNNN----PDEKSI----IT 647

  Fly   543 YQGRHIQGGPFTCAVFDASGVSVHGLDGAMPLRAHTFEVDARGVGVS-----GELHVDIVHDKHS 602
            |                     |..|:.|.||.....:..|.| |..     |:|..|..|    
 Worm   648 Y---------------------VSSLNNAFPLEPEMSKYVASG-GKRLEEEIGKLQADADH---- 686

  Fly   603 LVCSVEKIVENKYRVTFMPRQNGKYRVYIYFNGYDVKGSPFIM----RVGTKGRSGKTRSSPLHD 663
            :..::|:|.:::                      .::.||.::    :|..|....|....|:.:
 Worm   687 IFKALEEISKDE----------------------ALQESPSLLLDSKQVSKKIEQLKVLLKPVEE 729

  Fly   664 SKHRSESPSMHFVSTTNTRHNDYRNSSLSRHNTAERTNSYSPQYSPKLDTTDYHSSSSRYYKRES 728
            .|....|.|...:.|.....:.....||.:|    ..::||       |..:..|.......|.:
 Worm   730 KKDTFISESKLVMKTVGPESDAKELDSLMKH----VEDAYS-------DVVELISDKEGLIDRCN 783

  Fly   729 EENHATPPPAPPPASGSPTVKYLNSADLYTETLNGRRDSKTSNSSSTKNDYYYDKENELYSQRRA 793
            ..|....|.       :.|.|..|..:|..||            .|....|..:|.:|.| .|..
 Worm   784 ASNRIAHPQ-------TETEKITNEIELLKET------------CSCCTPYQIEKISENY-YRFG 828

  Fly   794 VTKPKLTPPREERELTSTTNTSSSSSFQ------QRHQQLAT-STLTRSLSPIPSPTLNTRSSEV 851
            .|..|    |..|.|.||........::      |:|....| ..|..::.|...|         
 Worm   829 DTHIK----RMVRILRSTVMVRVGGGWEPLEESLQKHDPCRTKGRLNINMFPEARP--------- 880

  Fly   852 HTHSPLTIKTSNQYESSTRNITSSPRHASVSPVQRYSPNSAYITTATHRMGSPLTSPVSKNGYES 916
                   |...:..:|.|:|     |||...|:                .|:|  .|:.|...::
 Worm   881 -------IHALDLMQSFTKN-----RHAKQMPI----------------AGTP--GPIMKIREKT 915

  Fly   917 SRTVEKSSTYKSTSNY-VTDSNIRASPSLYGTAERLRRTGSP-----EPRIDHSSNVRVSSMKPA 975
            .|:|..|.....|:.| ||..:.|.:|.   ...|:.||.|.     :.|:...||::.|.::|:
 Worm   916 ERSVPMSGGLGGTAGYTVTTESPRKTPQ---RPFRIPRTPSDKTPGRQSRVGCVSNLKNSIVEPS 977

  Fly   976 ----SARRDSWDVINKTKHM 991
                |..|.|.:|.::.|.:
 Worm   978 SPSQSESRASPEVADRQKRI 997

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jbugNP_001261140.1 CH_jitterbug-like_rpt1 57..166 CDD:409076 40/108 (37%)
CH_jitterbug-like_rpt2 170..274 CDD:409078 30/124 (24%)
CH_jitterbug-like_rpt3 275..373 CDD:409034 18/168 (11%)
IG_FLMN 468..560 CDD:214720 19/119 (16%)
IG_FLMN 560..648 CDD:214720 16/96 (17%)
IG_FLMN 1119..1198 CDD:214720
IG_FLMN 1220..1302 CDD:214720
IG_FLMN 1310..1389 CDD:214720
IG_FLMN 1399..1480 CDD:214720
IG_FLMN 1480..1569 CDD:214720
IG_FLMN 1575..1659 CDD:214720
IG_FLMN 1661..1747 CDD:214720
IG_FLMN 1757..1837 CDD:214720
IG_FLMN 1837..1926 CDD:214720
IG_FLMN 1936..2023 CDD:214720
Filamin 2021..2111 CDD:395505
IG_FLMN 2198..2280 CDD:214720
IG_FLMN 2285..2375 CDD:214720
IG_FLMN 2376..2465 CDD:214720
Filamin 2474..2555 CDD:395505
IG_FLMN 2657..2751 CDD:214720
IG_FLMN 2756..2847 CDD:214720
IG_FLMN 2850..2944 CDD:214720
M116.5NP_501432.4 CH_PLEC-like_rpt1 38..142 CDD:409037 40/106 (38%)
CH_SF 179..285 CDD:469584 28/108 (26%)
CH_SF <422..469 CDD:469584 8/46 (17%)
CH_SF <604..657 CDD:469584 16/81 (20%)
GAS2 796..868 CDD:128539 21/88 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.