DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pten and tns2a

DIOPT Version :9

Sequence 1:NP_001162933.1 Gene:Pten / 43991 FlyBaseID:FBgn0026379 Length:514 Species:Drosophila melanogaster
Sequence 2:XP_001921043.3 Gene:tns2a / 799109 ZFINID:ZDB-GENE-090312-163 Length:1616 Species:Danio rerio


Alignment Length:471 Identity:119/471 - (25%)
Similarity:200/471 - (42%) Gaps:97/471 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MANTISLMSNVIRNVV----SKKRI--RYKEKGYDLDLTYINDNIIAMGYPAPDKLEGLFRNRLE 59
            :.:|.||.....||.:    |..|:  |..|:.||.|||||.:.||::.:| |...|..:|..|.
Zfish   112 LGSTKSLTYTKQRNTLPRSFSVDRVMDRVMERHYDFDLTYITERIISVFFP-PLLEEQRYRLNLR 175

  Fly    60 DVFKLLEENHAQHYKIYNLCSERSYDVAKFRGRVAVYPFDDHNPPTIELIQRFCSDVDMWLKEDS 124
            :|..:|:..|...:.:.|| |||.:|:.:...:|..:.:.|.:.|.::.|...|..::.||..|.
Zfish   176 EVAAMLKSKHQDKFLLLNL-SERRHDITRLNPKVHDFGWPDMHSPPLDKICAMCKAMENWLNSDP 239

  Fly   125 SNVVAVHCKAGKGRTGTMICAYLVFSGIKKSADEALAWYD-EKRTKDRKGVTI-PSQRRYVQYFS 187
            .:||.:|||..||:||.:|.||:.:|.|...||:||:... .|..:|:...:: |||.||:|||.
Zfish   240 QHVVVLHCKGNKGKTGVIIAAYMHYSKISAGADQALSTLAMRKFCEDKVASSLQPSQNRYIQYFG 304

  Fly   188 KLVCSSVPYSKVSLNVCEI------RFSES-------SCVQNLGMVECS-ISVLHDSATENAKPD 238
            .|:..|:..:...|.:.::      .|.|.       ...|::.:|..| |..|..||:      
Zfish   305 GLLSGSIKMNSSPLFLHQVLIPTIPNFQEDDGFFPFLKIYQSMQLVYTSGIYDLQGSAS------ 363

  Fly   239 RLKTLPIDFQKSFVLTIKPSIPVSGDVKFELTKKSPDKIICHFWLNTFFVRNYSPCESDGTVNKY 303
                      :..::||:|::.:.||:          .:.|:.       |.....|.|......
Zfish   364 ----------RRLIITIEPALLLKGDI----------MVKCYH-------RRVESAERDSVFRLQ 401

  Fly   304 IHT---------LSKSEIDDVHKDSEHKRFSEEFKISIVFEAENFSNDVQAEASEKERNENVLNF 359
            .||         ..|.|:|:...|.   :|..:..:..||.    |...:.:....:||:..::.
Zfish   402 FHTCTVHAAQLWFGKGELDEACSDD---KFPPDAIVEFVFS----SGPEKIKGRVSQRNDPAVSV 459

  Fly   360 ERSDYDSLSP----NCYAEKKVLTAIVNDNTTKSQTIETLDHKDIVTKIQYDTSTNSKNTSTACK 420
               ||::..|    :.|.         |.|.....::|.:.|    |:...|.|..::    ..|
Zfish   460 ---DYNTNDPVVRWDSYE---------NFNQRHQDSLEDIAH----TRGPVDGSLYAQ----VKK 504

  Fly   421 RKQPNSKTLLPSLNDS 436
            |:.....:.|||.|.|
Zfish   505 RRAAAGCSSLPSTNGS 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtenNP_001162933.1 PTPc 58..167 CDD:304379 36/109 (33%)
PTEN_C2 196..335 CDD:287393 27/161 (17%)
tns2aXP_001921043.3 C1 45..91 CDD:237996
PTPc_motif 205..325 CDD:214649 39/119 (33%)
PTEN_C2 313..440 CDD:313607 28/166 (17%)
Atrophin-1 <903..1322 CDD:331285
SH2_Tensin_like 1340..1455 CDD:198181
PTB_tensin 1479..1611 CDD:269924
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.