DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pten and PTPRF

DIOPT Version :9

Sequence 1:NP_001162933.1 Gene:Pten / 43991 FlyBaseID:FBgn0026379 Length:514 Species:Drosophila melanogaster
Sequence 2:XP_005271136.1 Gene:PTPRF / 5792 HGNCID:9670 Length:1922 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtenNP_001162933.1 PTPc 58..167 CDD:304379
PTEN_C2 196..335 CDD:287393
PTPRFXP_005271136.1 I-set 33..124 CDD:254352
Ig 50..121 CDD:143165
I-set 135..225 CDD:254352
Ig2_RPTP_IIa_LAR_like 152..226 CDD:143215
IG_like 242..319 CDD:214653
Ig3_RPTP_IIa_LAR_like 250..318 CDD:143216
FN3 323..412 CDD:238020
FN3 419..511 CDD:238020
FN3 516..605 CDD:238020
fn3 613..700 CDD:278470
FN3 714..820 CDD:238020
FN3 825..914 CDD:238020
FN3 923..1011 CDD:238020
FN3 1020..>1079 CDD:238020
PTPc 1366..1621 CDD:214550
PTPc 1392..1621 CDD:238006
PTPc 1657..1912 CDD:214550
PTPc 1682..1912 CDD:238006
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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