DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pten and ptp-3

DIOPT Version :9

Sequence 1:NP_001162933.1 Gene:Pten / 43991 FlyBaseID:FBgn0026379 Length:514 Species:Drosophila melanogaster
Sequence 2:NP_001263671.1 Gene:ptp-3 / 174685 WormBaseID:WBGene00004215 Length:2248 Species:Caenorhabditis elegans


Alignment Length:601 Identity:106/601 - (17%)
Similarity:201/601 - (33%) Gaps:202/601 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NTISLMSNVIRNVVSKKRIRYKEKGYDLDLTY-------INDNIIAMGYPAPDKLEGLFRNR--- 57
            ||:.:..:...|:..|.|.......|.|:..|       ||...:|:|||.|    .:|..:   
 Worm   273 NTLGVAHSKAANLYVKVRRVPPYFSYKLERQYVVGVGGNINLTCVAVGYPMP----RVFWKKTDL 333

  Fly    58 --LED---------VFKLLEENHAQHYKIYNLCSERSYD-----VAKFRGRVAVYPFDDHNPPTI 106
              |:|         |..|......:::....:.:..:.:     :||           :..||.:
 Worm   334 MVLDDPSTAPIGKNVLTLTHVESTENFTCVAVSALGNIEATTTVIAK-----------ELPPPPV 387

  Fly   107 ELIQRFCSDVDMWLKEDSSNVVAVHCKAGKGRTGTMICAYLVFSGIK-KSADEALAWYDEKRTKD 170
            .::          :...:|..|.:..|..|  ....|..|:|...:| ::.|:|..:..:.|.:|
 Worm   388 NIV----------VSSVTSESVVITWKPPK--YNEAINKYVVNYRLKSENKDDAALFAKDSRAED 440

  Fly   171 RKGVTIPSQRRYVQYFSKLVCSSVPYSKVSLNVCEIRFSESSCVQNL-------GMVECSISVLH 228
            ..    .|:|               ||       |.|.|....::.|       |:|...   .:
 Worm   441 ES----DSER---------------YS-------EGRSSRGKTMETLENSLVIDGLVAFQ---TY 476

  Fly   229 DSATENAKP--DRLKTLPIDFQKSFVLTIKPSIPVSGDVKFELTKKSPDKIICHFWLNTFFVRNY 291
            :....:|.|  ..|::||::.|      .|||.|.:..|..:....:.|.|:.          .:
 Worm   477 EFTVRSAGPVGVGLESLPVEAQ------TKPSKPATAPVSPQARSLNRDSILV----------KW 525

  Fly   292 SPCES-DGTVNKY-IHTLSKSEIDDVHKDSEHKRFSEEFKISIVFEAENFSNDVQAEASEKERNE 354
            .|||. :|.:..| ::..:......:.:..:|...|:||..:|        |.::.::....|  
 Worm   526 GPCEQPNGLITGYKVYYTNDLVTTPIREWKQHDAKSDEFMTTI--------NGLEPDSRYFVR-- 580

  Fly   355 NVLNFERSDYDSLSPNCYAEKKVLTAIVNDNTTKS-------QTIETLDHKD------------- 399
              :..:.|:.||          .|:.:|...|.:.       .|::.||.:.             
 Worm   581 --VIAQNSEGDS----------PLSTLVTVATRQGIPGQPPMLTVKALDSRRMQLTWDKPLYSSP 633

  Fly   400 -IVTKIQYDTSTNSKNTSTACKRKQPNSKTLLPSL-------------NDSTKEEIKRNHIFNQP 450
             :...::|:||...|..:..    .|:.|.::..|             :|..:.|      |.:|
 Worm   634 VVGYTVRYNTSDGEKELTLT----SPHEKHVVTGLHPDKYYYFRVAAYSDRGQGE------FTEP 688

  Fly   451 SIKKTDLIKWQNSEVHITSDT---------RSIN------ENKNIN-----YNSYITCKQSSPKF 495
            .|.||      .:.:.::|.|         :|:.      |.|.:|     |.......:.|...
 Worm   689 MISKT------IASIPLSSPTIVSAAATSSKSVEIRWKGPEQKKLNGVLTAYRINYFRLEDSKTA 747

  Fly   496 NCGTEDGEEDWESGES 511
            |..:.:.:||.:...|
 Worm   748 NLESVEYDEDMDDSSS 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtenNP_001162933.1 PTPc 58..167 CDD:304379 18/123 (15%)
PTEN_C2 196..335 CDD:287393 31/149 (21%)
ptp-3NP_001263671.1 I-set 93..184 CDD:254352
Ig 106..185 CDD:299845
IG_like 201..287 CDD:214653 3/13 (23%)
Ig 212..288 CDD:299845 3/14 (21%)
IG_like 302..378 CDD:214653 13/79 (16%)
Ig 309..377 CDD:299845 12/71 (17%)
FN3 383..499 CDD:238020 30/162 (19%)
FN3 507..600 CDD:238020 20/124 (16%)
FN3 605..693 CDD:238020 15/97 (15%)
FN3 700..813 CDD:238020 12/64 (19%)
FN3 818..918 CDD:238020
FN3 923..1020 CDD:238020
FN3 1027..1116 CDD:238020
fn3 1125..1213 CDD:278470
PTPc 1694..1949 CDD:214550
PTPc 1720..1949 CDD:238006
PTPc 1980..2239 CDD:214550
PTPc 2008..2239 CDD:238006
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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