DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sep5 and Tmem250

DIOPT Version :9

Sequence 1:NP_651961.1 Gene:Sep5 / 43990 FlyBaseID:FBgn0026361 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_001119767.1 Gene:Tmem250 / 499758 RGDID:1564379 Length:139 Species:Rattus norvegicus


Alignment Length:69 Identity:17/69 - (24%)
Similarity:26/69 - (37%) Gaps:18/69 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 SYKALVEYVDSQFEAYLQEELKIQRAMASAHDGRVHACLYFIC-----PTGHGLKAMDLVCMKQL 177
            |:.|..:|  :.|:.|::.....         |.:...|||.|     .....|.|  |.|::.|
  Rat    31 SHLARTKY--NNFDVYVKTRWLY---------GFIRFLLYFSCSLFTAALWGALAA--LFCLQYL 82

  Fly   178 DTRV 181
            ..||
  Rat    83 GVRV 86

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sep5NP_651961.1 CDC3 25..394 CDD:227352 17/69 (25%)
CDC_Septin 43..311 CDD:206649 17/69 (25%)
BAR <252..405 CDD:299863
Tmem250NP_001119767.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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