DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sep5 and spn6

DIOPT Version :9

Sequence 1:NP_651961.1 Gene:Sep5 / 43990 FlyBaseID:FBgn0026361 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_001342876.1 Gene:spn6 / 2538950 PomBaseID:SPCC188.12 Length:380 Species:Schizosaccharomyces pombe


Alignment Length:406 Identity:119/406 - (29%)
Similarity:195/406 - (48%) Gaps:46/406 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VGFDTLPDQLVNKSVQNGFSFNILCIGETALGKSTLMDTLFNTSFGSTPSPHNL------PNVKL 85
            :..|:||.:..|...:......|:..|.:..||:|..:|||.||.....|....      ..:::
pombe    11 LNLDSLPSKRENLIKRKECGLTIMLCGASGTGKTTFFNTLFATSLQPEKSYETAKETIAKKTLEV 75

  Fly    86 KANTYELQESNVRLKLTVCDTIGYGDQVNKADSYKALVEYVDSQFEAYL---QEELKIQRAMASA 147
            |.|...::|....:.|||.||.|:||.::....:..:.||:|.|.|.||   |..|::.|     
pombe    76 KKNKAVIEEDGFHINLTVLDTPGFGDFIDNTSCWNTVAEYLDEQHERYLIHDQNSLRVPR----- 135

  Fly   148 HDGRVHACLYFICPTGHGLKAMDLVCMKQLDTRVNIIPVIAKADTISKSELSGFKERIMDELRRN 212
            .|.|||.|||||.|...|:..:|::.||:|.|.||::||||||||.:..||:..|::|...|...
pombe   136 KDTRVHVCLYFITPVSFGMLPLDVLAMKELSTHVNLVPVIAKADTFTTPELTQIKQKIRRILEAQ 200

  Fly   213 NVSIYQFPMDDETVSETNAAMNGHLPFAVVGS-TEFVKVAGKQVRARQYPWGAVHIENEAHCDFV 276
            ::.::. |..:.:..||...::..||:|::.| .|..|..|::.:.|:||||...|..|.||||:
pombe   201 SIDVFH-PSTEYSDYETAELLDSSLPYAIISSVNEVCKDDGEKSQGRRYPWGTSEIYEETHCDFL 264

  Fly   277 KLREMLIRTNMEDLREQTHTRHYELFRQRRLQQMGFVDVDSNNQPVSFQQTFESKRSDHLACLQA 341
            ||:::||..:|.:|...|.|..||.:|:.:|              .:.:......:.:|...|..
pombe   265 KLKKLLINRHMLELINTTETNIYERYRREQL--------------TNRKSGIPKLKKEHYERLNN 315

  Fly   342 KEEEVRQMFVQRVKQKENELKDNEKELHTKFDRLKREHLEEKAQLEEARRQLEEDCQELQRRRLQ 406
            ::..::|...|...:.|:..:..|:::....|.|.    .|.::..|..|.||...:.|:..:  
pombe   316 EKRAIQQKITQMTNETESFFQAKEEKMIETRDALN----SELSEYHERIRALETQIESLKSYK-- 374

  Fly   407 MANGSHTLTLGRGKKK 422
                      |||.||
pombe   375 ----------GRGHKK 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sep5NP_651961.1 CDC3 25..394 CDD:227352 111/376 (30%)
CDC_Septin 43..311 CDD:206649 96/277 (35%)
BAR <252..405 CDD:299863 38/152 (25%)
spn6NP_001342876.1 CDC3 17..375 CDD:227352 112/393 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18884
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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