Protein Alignment Sdic1 and dync1i2b

DIOPT Version :10

• Sequence 1: NP_524670.2
• Gene: Sdic1 / 43984
• FlyBaseID: FBgn0067861
• Length: 517
• Species: Drosophila melanogaster
• Sequence 2: XP_009300385.2
• Gene: dync1i2b / 561612
• ZFINID: ZDB-GENE-090121-1
• Length: 645
• Species: Danio rerio
• Alignment Length: 525
• Identity: 254/525 - (48%)
• Similarity: 336/525 - (64%)
• Gaps: 67/525 - (12%)

  Fly    23 PLNLSVYNVQATNIPPKETLVYTKQTQT-TSTGGGNGDVLAFDAQGDDEESSLQNLGNGFTSKLP 86
            ||.|.:..|...:.||||.:.|:|:||| |.|           ...:|||..
Zfish   145 PLKLGMSKVTQVDFPPKEMVSYSKETQTPTQT-----------HHKEDEEEE------------- 185

  Fly    87 PGYLTHGLPTVKDVA---PAITPLEIKKETEVKKEV--NELSEEQKQMIILSENFQRFVVRAGRV 146
                       :|:|   |.:.|.|.|...:.:.|.  :||:||:||.|:.||.|..|...:.|:
Zfish   186 -----------EDLAVMQPVMEPQEEKDSQKEEDEASPHELTEEEKQQILHSEEFVTFFDHSSRI 239

  Fly   147 IERALSENVDIYTDYIGGGDSEEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVG 211
            :||||||.||::.||.|....::..:.::.|:|||||.|.||||||:|.:|.:|||..:|||:|.
Zfish   240 MERALSEQVDVFFDYSGRDLQDKEGESQAGAKLSLNRQFADERWSKHRVVTCLDWSPQYPELLVA 304

  Fly   212 SYHNNEESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDN 276
            ||.:|||:|:|||||.:|||.|:||:|||.||||||||||..||:|:|||::|||||||||||||
Zfish   305 SYCSNEEAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSAAFAQFHPNLVVGGTYSGQIVLWDN 369

  Fly   277 RVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQQR 341
            |..||||:|||||||:||||||||:.:||||||||:||||:|||:|||||||||.|||:|||..:
Zfish   370 RSNKRTPVQRTPLSASAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLDMLSTPQDSLELVFK 434

  Fly   342 QSKAIAITSMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSPD 406
            |||::|:|||:||..::|:.|:|||||.||:|.|||.::|::|::|.|.|||||:..|......|
Zfish   435 QSKSVAVTSMSFPLGDVNNFVVGSEDGSVYTACRHGSKAGISEMFEGHHGPITGLDCHTAAGPVD 499

  Fly   407 FGHLFLTSSIDWTIKLWSLKDTKPLYSFEQY------IAWSPVR------------------RQR 447
            |.|||:|||.|||:|||..|:.|||||||..      :.|||..                  ...
Zfish   500 FSHLFVTSSFDWTVKLWGTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGVGHLDLWNLNNE 564

  Fly   448 PPGPDKTQPRHGAPALRRDSWTPSG--LCIGDEAGKLYVYDVAENLAQPSRDEWSRFNTHLSEIK 510
            ...|..:....|.|||.|..|..||  :.:||..|:|::|||.|.::.|.:|||:||...|:||.
Zfish   565 TEVPTASVTVEGNPALNRVRWAHSGREVAVGDSEGQLHIYDVGEQISVPRQDEWTRFVRTLTEIN 629

  Fly   511 MNQGD 515
            .|:.|
Zfish   630 ENRED 634

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sdic1	NP_524670.2	Dynein_IC2	21..51	CDD:463291	13/28 (46%)
		WD40	196..>445	CDD:475233	164/272 (60%)
		WD40 repeat	196..245	CDD:293791	30/48 (63%)
		WD40 repeat	251..289	CDD:293791	28/37 (76%)
		WD40 repeat	298..337	CDD:293791	30/38 (79%)
		WD40 repeat	349..386	CDD:293791	20/36 (56%)
		WD40 repeat	393..435	CDD:293791	24/41 (59%)
dync1i2b	XP_009300385.2	None