DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sdic1 and DYNC1I2

DIOPT Version :9

Sequence 1:NP_524670.2 Gene:Sdic1 / 43984 FlyBaseID:FBgn0067861 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_001258714.1 Gene:DYNC1I2 / 1781 HGNCID:2964 Length:638 Species:Homo sapiens


Alignment Length:531 Identity:253/531 - (47%)
Similarity:345/531 - (64%) Gaps:76/531 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDVLAFDAQGDDEESSLQNLGNGFTSKLPP 87
            |:.|.:..:...:.||:|.:.|||:|||        .|:|...:.::|:..:             
Human   135 PIKLGMAKITQVDFPPREIVTYTKETQT--------PVMAQPKEDEEEDDDV------------- 178

  Fly    88 GYLTHGLPTVKDVAPAITPLEIKKETEVKKE--------VNELSEEQKQMIILSENFQRFVVRAG 144
                        |||. .|:|.::|..:||:        .:||:||:||.|:.||.|..|...:.
Human   179 ------------VAPK-PPIEPEEEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHST 230

  Fly   145 RVIERALSENVDIYTDYIGGGDSEEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELV 209
            |::||||||.::|:.||.|....::..:.::.|:|||||.|:||||||:|.::.:|||:.:|||:
Human   231 RIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELL 295

  Fly   210 VGSYHNNEESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLW 274
            |.||:|||::|:|||||.:|||.|:||:|||.||||||||||..||||:|||::|||||||||||
Human   296 VASYNNNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLW 360

  Fly   275 DNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQ 339
            |||..||||:||||||||||||||||:.:||||||||:||||:|||:|||||||||.|||::||.
Human   361 DNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELV 425

  Fly   340 QRQSKAIAITSMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLS 404
            .:||||:|:|||:||..::|:.|:|||:|.||:|.|||.::|::|::|.|.||||||..|....:
Human   426 HKQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGA 490

  Fly   405 PDFGHLFLTSSIDWTIKLWSLKDTKPLYSFEQY------IAWSPVRRQRPPG------------- 450
            .||.|||:|||.|||:|||:.|:.|||||||..      :.|||..    |.             
Human   491 VDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTH----PALFACVDGMGRLDL 551

  Fly   451 ---------PDKTQPRHGAPALRRDSWTPSG--LCIGDEAGKLYVYDVAENLAQPSRDEWSRFNT 504
                     |..:....|.|||.|..||.||  :.:||..|::.:|||.|.:|.|..|||:||..
Human   552 WNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWARFGR 616

  Fly   505 HLSEIKMNQGD 515
            .|:||..|:.|
Human   617 TLAEINANRAD 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sdic1NP_524670.2 Dynein_IC2 23..51 CDD:288403 10/27 (37%)
NtpH 108..>178 CDD:225368 26/77 (34%)
WD40 196..>445 CDD:295369 165/254 (65%)
WD40 <196..442 CDD:225201 163/251 (65%)
WD40 repeat 196..245 CDD:293791 29/48 (60%)
WD40 repeat 251..289 CDD:293791 29/37 (78%)
WD40 repeat 298..337 CDD:293791 30/38 (79%)
WD40 repeat 349..386 CDD:293791 19/36 (53%)
WD40 repeat 393..435 CDD:293791 25/41 (61%)
DYNC1I2NP_001258714.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..135 253/531 (48%)
Dynein_IC2 135..163 CDD:402922 11/35 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..214 21/92 (23%)
WD 1 277..326 28/48 (58%)
WD40 repeat 282..331 CDD:293791 29/48 (60%)
WD40 329..>599 CDD:225201 152/273 (56%)
WD 2 330..370 32/39 (82%)
WD40 repeat 339..377 CDD:293791 30/37 (81%)
WD 3 379..420 33/40 (83%)
WD40 repeat 385..426 CDD:293791 31/40 (78%)
WD 4 429..469 22/39 (56%)
WD40 repeat 434..481 CDD:293791 24/46 (52%)
WD 5 474..519 26/44 (59%)
WD40 repeat 489..521 CDD:293791 20/31 (65%)
WD 6 522..562 4/43 (9%)
WD40 repeat 527..565 CDD:293791 5/41 (12%)
WD 7 568..607 17/38 (45%)
WD40 repeat 573..599 CDD:293791 10/25 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165140643
Domainoid 1 1.000 377 1.000 Domainoid score I864
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 600 1.000 Inparanoid score I957
Isobase 1 0.950 - 0 Normalized mean entropy S2725
OMA 1 1.010 - - QHG54336
OrthoDB 1 1.010 - - D1453532at2759
OrthoFinder 1 1.000 - - FOG0001314
OrthoInspector 1 1.000 - - mtm8531
orthoMCL 1 0.900 - - OOG6_101571
Panther 1 1.100 - - O PTHR12442
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X812
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.720

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