DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and htr7c

DIOPT Version :10

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_002662019.5 Gene:htr7c / 572143 ZFINID:ZDB-GENE-060526-5 Length:400 Species:Danio rerio


Alignment Length:582 Identity:139/582 - (23%)
Similarity:204/582 - (35%) Gaps:255/582 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 WTEPANLISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFSAT 79
            :|....::...:|..|..:.:.||.||:.||....|||..:|:.:|:||||||.|.:.|:||...
Zfish    48 FTAAEKIVIGLMLAIITTVTVIGNMLVVIAVCVVKKLRQPSNYLLVSLAVADLSVAIVVMPFVIV 112

  Fly    80 WEVF-KVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAG 143
            .::. ..|:||:::|.|::.:||..|||||:.||.||:|||:.:|||:|||:..:.:....:|.|
Zfish   113 TDLTGGKWLFGEVFCNIFIGMDVMCCTASIMTLCVISVDRYLGITRPLTYPARQNGQLMAKMIFG 177

  Fly   144 IWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSP 208
            :|::|..|..||..||                                                 
Zfish   178 VWLVSASITLPPFCGW------------------------------------------------- 193

  Fly   209 PHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQ 273
                                                  |....||.                   
Zfish   194 --------------------------------------AKNVNTAG------------------- 201

  Fly   274 NRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTKG 338
                        .|.::.|.||.:||...:|||||.||||.|::|::||.::            |
Zfish   202 ------------VCLISQDFGYTIYSTAVAFYIPMIVMLFMYYKIFKAARKS------------G 242

  Fly   339 SKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLHHHDKIK 403
            :|               ||....:::                     |||...|:          
Zfish   243 AK---------------HRFTDFSRR---------------------ERLETVAS---------- 261

  Fly   404 ISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVASSCYLQ 468
                                                      |:...|..:.|...|||..|   
Zfish   262 ------------------------------------------EALRMQGLKPQHTPGVAEEC--- 281

  Fly   469 VGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKTLAIIVGMFIFCWC 533
              ..|..|..|:                    |:||..    |:.|.|||.||.:|||:|..||.
Zfish   282 --AALSRLLSRE--------------------RQNISI----FKREQKAATTLGVIVGVFGICWL 320

  Fly   534 PFFTMYIIRPF-----CQDCVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRIICRC 590
            |||.:...|||     | .|:...|...|.|.||.||.:||.|||.|::|.|..::.:: ||
Zfish   321 PFFILSTARPFICGVKC-SCIPIWLERTLLWFGYANSLMNPFIYAFFNRDLRSTYRDLL-RC 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 136/567 (24%)
TM helix 1 22..48 CDD:320191 8/25 (32%)
TM helix 2 55..81 CDD:320191 12/25 (48%)
TM helix 3 93..123 CDD:320191 16/29 (55%)
TM helix 4 135..158 CDD:320191 7/22 (32%)
TM helix 5 292..321 CDD:320191 16/28 (57%)
TM helix 6 512..542 CDD:320191 15/29 (52%)
TM helix 7 551..576 CDD:320191 12/24 (50%)
htr7cXP_002662019.5 7tmA_5-HT7 54..374 CDD:320452 136/567 (24%)
TM helix 1 55..81 CDD:320452 8/25 (32%)
TM helix 2 88..114 CDD:320452 12/25 (48%)
TM helix 3 127..157 CDD:320452 16/29 (55%)
TM helix 4 169..191 CDD:320452 7/21 (33%)
TM helix 5 208..237 CDD:320452 16/28 (57%)
TM helix 6 299..329 CDD:320452 15/29 (52%)
TM helix 7 342..367 CDD:320452 12/24 (50%)

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