DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and LOC567498

DIOPT Version :10

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001430360.1 Gene:LOC567498 / 567498 -ID:- Length:398 Species:Danio rerio


Alignment Length:646 Identity:161/646 - (24%)
Similarity:227/646 - (35%) Gaps:290/646 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 WT---EPANLISL-AVLEFINVLVIGGNCLVIAAVFCSNKLR-SVTNFFIVNLAVADLLVGLAVL 74
            |:   |||..:.| ..|..:.:..:.||.:|.|||.....|| .|||.|||:||::||||.:.|:
Zfish    12 WSVHGEPAGRVFLGCALSLLVLWTLLGNFMVCAAVLRFRHLRGKVTNVFIVSLAMSDLLVAVLVM 76

  Fly    75 PFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKS 139
            |:.|..||...|.||. :|..|:|.|:...||||||||.||||||.|::.|..|...|:.:.|..
Zfish    77 PWKAATEVTGHWAFGS-FCECWVAFDIMCSTASILNLCVISLDRYWAISDPFQYERKMNRRVALV 140

  Fly   140 LIAGIWVLSFFICFPPL-VGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEAS 203
            :::..|::|..|.|.|: :.|               |.                           
Zfish   141 MVSVTWIVSVAISFVPVQLNW---------------HR--------------------------- 163

  Fly   204 LPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLL 268
                                 |.:|                       |.::|:.|..||     
Zfish   164 ---------------------ADLD-----------------------TVNTSNWTTKEM----- 179

  Fly   269 NAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGF 333
                              |:.:..|.|.:.|:|.|||||:.|||..|.||||.|....::|:   
Zfish   180 ------------------CDSSLSRTYAISSSLISFYIPVAVMLVTYTRIYRIAQIQIKSIS--- 223

  Fly   334 KTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLHH 398
                                                              |.||.:         
Zfish   224 --------------------------------------------------SLERAA--------- 229

  Fly   399 HDKIKISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVAS 463
                                       ||.||.:|                           .|.
Zfish   230 ---------------------------ERAQSCSA---------------------------GAR 240

  Fly   464 SCYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKTLAIIVGMF 528
            :|.||                                .|.|:        |||..|||::|:|:|
Zfish   241 TCPLQ--------------------------------HRAIR--------ETKLFKTLSVIMGVF 265

  Fly   529 IFCWCPFFTMYIIRPFCQ--DCVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRIICRC- 590
            :.||.|||.:....|||.  |||....|:|..|.|:|||::||:||| |:.|||.||.|::| | 
Zfish   266 VCCWFPFFVLNCAVPFCHKPDCVSEATFNVFVWFGWCNSSLNPIIYA-FNSDFRDAFARLLC-CH 328

  Fly   591 -FCSRQSVSLKS------SRRGSDMSAIRI------RARTPSITPSAAAHSFGDESELHHS 638
             .||:..|.::.      :.:||.::.:.:      |.......|....|.|.||||:.||
Zfish   329 GLCSKTPVGVQCKDPVAINNQGSSVTTMEVGCASFSRMDNEMQCPLVELHMFADESEVQHS 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 137/566 (24%)
TM helix 1 22..48 CDD:320191 8/26 (31%)
TM helix 2 55..81 CDD:320191 14/25 (56%)
TM helix 3 93..123 CDD:320191 19/29 (66%)
TM helix 4 135..158 CDD:320191 6/23 (26%)
TM helix 5 292..321 CDD:320191 16/28 (57%)
TM helix 6 512..542 CDD:320191 14/29 (48%)
TM helix 7 551..576 CDD:320191 12/24 (50%)
LOC567498NP_001430360.1 None

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