DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and htr7b

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_021329876.1 Gene:htr7b / 565304 ZFINID:ZDB-GENE-091118-105 Length:404 Species:Danio rerio


Alignment Length:590 Identity:147/590 - (24%)
Similarity:216/590 - (36%) Gaps:264/590 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DLIKSVKWTEPANLISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLA 72
            ||.|:|       ::.| :|..|..:.:.||.||:.||....|||..:|:.:|:||:|||.|.:|
Zfish    52 DLTKTV-------IVGL-MLSSITAVTVMGNTLVVIAVCVVKKLRQPSNYLLVSLAIADLSVAVA 108

  Fly    73 VLPFSATWEVF-KVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKK 136
            |:||:...::. .||:||:::|.|::.:||..|||||:.||.||:|||:.:|||:|||:..:.:.
Zfish   109 VMPFAIVTDLTGGVWLFGEVFCNIFIGMDVMCCTASIMTLCVISVDRYLGITRPLTYPARQNGQL 173

  Fly   137 AKSLIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGE 201
            ...:|.|:|::|..|..||..||                                          
Zfish   174 MAKMIVGVWLVSASITLPPFCGW------------------------------------------ 196

  Fly   202 ASLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLD 266
                          |:|              :..|.:                            
Zfish   197 --------------AHN--------------VNTAGV---------------------------- 205

  Fly   267 LLNAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQ 331
                                |.::.|.||.|||...:|||||.||||.|::|::||.|:      
Zfish   206 --------------------CLISQDVGYTLYSTAVAFYIPMVVMLFMYYKIFKAARRS------ 244

  Fly   332 GFKTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRL 396
                  |:|                           |:       .|:|                
Zfish   245 ------GAK---------------------------HN-------FTSL---------------- 253

  Fly   397 HHHDKIKISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRE-STESQLYRQQQQHG 460
               ..|:::...|:...:.....||                ..||....| ||.|.|..::    
Zfish   254 ---PPIQLACPEPALATVDGFCMHG----------------MKNGATSEEFSTLSCLLNRE---- 295

  Fly   461 VASSCYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKTLAIIV 525
                             ||.::.                           ||.|.|||.||.:|:
Zfish   296 -----------------RRSASI---------------------------FRREQKAATTLGVIM 316

  Fly   526 GMFIFCWCPFFTMYIIRPF-----CQDCVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKR 585
            |:|.|||.|||.....|||     | :|....|..||.||||.||.:||.|||.|::|.|..:|.
Zfish   317 GVFSFCWLPFFLFTTARPFICGLLC-NCAPVWLERVLLWLGYTNSLMNPFIYAFFNRDLRSTYKD 380

  Fly   586 IICRC 590
            :: ||
Zfish   381 LL-RC 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 53/125 (42%)
7tm_1 37..>181 CDD:278431 56/144 (39%)
htr7bXP_021329876.1 7tmA_5-HT7 57..378 CDD:320452 141/576 (24%)
TM helix 1 58..84 CDD:320452 9/26 (35%)
TM helix 2 91..117 CDD:320452 12/25 (48%)
TM helix 3 130..160 CDD:320452 16/29 (55%)
TM helix 4 172..194 CDD:320452 7/21 (33%)
TM helix 5 211..240 CDD:320452 17/28 (61%)
TM helix 6 303..333 CDD:320452 16/29 (55%)
TM helix 7 346..371 CDD:320452 14/24 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24247
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.100

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