DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oamb and LOC563567

DIOPT Version :10

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_021330044.2 Gene:LOC563567 / 563567 -ID:- Length:447 Species:Danio rerio


Alignment Length:698 Identity:158/698 - (22%)
Similarity:229/698 - (32%) Gaps:319/698 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 AVLEFINVLVIG----GNCLVIAAVFCSNKLRS-VTNFFIVNLAVADLLVGLAVLPFSATWEVFK 84
            |:|.|:..|:|.    ||.||.|||.....||| |||||:::|||:||.|.:.|:|:.|...|..
Zfish    35 ALLGFVLFLLIVSTLLGNTLVCAAVVKFRHLRSKVTNFFVISLAVSDLFVAVLVMPWEAISAVAG 99

  Fly    85 VWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGIWVLSF 149
            .|:|| .:|.||:|.|:...||||||||.||:|||.|:..|..|...|:.:.|..:|...|.||.
Zfish   100 TWLFG-RFCGIWIAFDIMCSTASILNLCIISVDRYWAIASPFRYERKMTHRVAFMMIGVAWTLSI 163

  Fly   150 FICFPPL-VGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSPPHIGN 213
            .|.|.|: :.|.                      |:..::...|                   ||
Zfish   164 LISFIPVQLNWH----------------------MADDDEEGAG-------------------GN 187

  Fly   214 GNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQNRPQT 278
            |..|:.                                                           
Zfish   188 GTDYSD----------------------------------------------------------- 193

  Fly   279 ISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTKGSKGIG 343
                   .|:...:|.|.:.|:|.|||||:.:|:..|.||:|.|....|.|:             
Zfish   194 -------NCKANLNRTYAISSSLISFYIPVIIMIATYTRIFRIAQTQIRRIS------------- 238

  Fly   344 SRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLHHHDKIKISVSY 408
                                                    |.||..::|.   :||..       
Zfish   239 ----------------------------------------SLERAVEHAQ---NHHQS------- 253

  Fly   409 PSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVASSCYLQVGKGL 473
                        .|..:|                |..::|                         
Zfish   254 ------------NDCSNE----------------NSLKTT------------------------- 265

  Fly   474 PELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKTLAIIVGMFIFCWCPFFTM 538
                                                 |:.|||..|||:||:|:|:|||.|||.:
Zfish   266 -------------------------------------FKKETKVLKTLSIIMGVFVFCWLPFFVL 293

  Fly   539 YIIRPFCQDCVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRIICRCFCSRQSVSLKSSR 603
            ..:.|||| ||....|::..|.|:.||::||:||| |:.|||.||..|:   .|::         
Zfish   294 NCMVPFCQ-CVSDTTFTIFVWFGWANSSLNPVIYA-FNADFRKAFSSIL---GCNK--------- 344

  Fly   604 RGSDMSAIRIRARTPSITPSAAAHSFGDESEL---HH------------SEMSNDPRXRSFGPSS 653
                            |.|..|..:....:||   ||            ::|:|....:|.....
Zfish   345 ----------------IFPCTAVETVNFSNELVSYHHDTTLQKEAQPLAAQMANTREEQSLPFDK 393

  Fly   654 SSQSSLGGLRKTSLKVP---VYEICHPLVMETACYSYVEATSDGSASC 698
            .|.:|.......::.:|   .:|....:.::|    ....||.|...|
Zfish   394 DSVTSNVSRNHKNMLLPNIGQFECDGEISLDT----ITPFTSTGLMEC 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 135/563 (24%)
TM helix 1 22..48 CDD:320191 12/26 (46%)
TM helix 2 55..81 CDD:320191 13/25 (52%)
TM helix 3 93..123 CDD:320191 19/29 (66%)
TM helix 4 135..158 CDD:320191 8/23 (35%)
TM helix 5 292..321 CDD:320191 13/28 (46%)
TM helix 6 512..542 CDD:320191 16/29 (55%)
TM helix 7 551..576 CDD:320191 10/24 (42%)
LOC563567XP_021330044.2 None

Return to query results.
Submit another query.