DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and htr7a

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_021323081.1 Gene:htr7a / 562111 ZFINID:ZDB-GENE-130530-666 Length:479 Species:Danio rerio


Alignment Length:630 Identity:154/630 - (24%)
Similarity:234/630 - (37%) Gaps:247/630 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NETECEDLIKSVKWTEPANLISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVAD 66
            |.|.|.:.|.|  :.|...::...||..:.::.|.||.||:.:|....|||..:|:.||:||:||
Zfish    88 NGTRCAEQILS--YGEVEKVLIGGVLTMLTLITICGNMLVVISVCFVKKLRQPSNYLIVSLALAD 150

  Fly    67 LLVGLAVLPF-SATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPS 130
            |.|.|||:|| |.|..:...||||..:|.:::|:||..|||||:.||.||:|||:.:|||:|||.
Zfish   151 LSVALAVMPFVSITDLIGGRWIFGKFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPV 215

  Fly   131 IMSTKKAKSLIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDS 195
            ..:......::..:|:||..|..|||.||                                    
Zfish   216 RQNGWCMAKMVLSVWLLSASITLPPLFGW------------------------------------ 244

  Fly   196 IKDQGEASLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTE 260
                                |.|..|.           |:                         
Zfish   245 --------------------AQNVNDD-----------RV------------------------- 253

  Fly   261 TEMDLDLLNAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAA-VR 324
                                      |.::.|.||.:||...:|||||.|||..|:||:||| :.
Zfish   254 --------------------------CLISQDFGYTIYSTAVAFYIPMTVMLVMYYRIFRAAKLS 292

  Fly   325 TTRAINQGFKTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLS 389
            ..:....||          .|.|::.:           ::|.:..:|..       |...|..: 
Zfish   293 AAKHTITGF----------PRVEQEEV-----------EEDEVEEDGGN-------GAEEPTGV- 328

  Fly   390 KYATRRLHHHDKIKISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYR 454
                      |.:.:::                                            :|.|
Zfish   329 ----------DCVTVAI--------------------------------------------KLQR 339

  Fly   455 QQQQHGVASSCYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRR-NIKAQVKRFRMETKAA 518
            :.::      |     ..||.:.|                   .:||| :.:..:..|:.|.|||
Zfish   340 EVEE------C-----ARLPRILR-------------------GVGRRCSDRRSISIFKREQKAA 374

  Fly   519 KTLAIIVGMFIFCWCPFFTMYIIRPF-----CQDCVDPLLFSVLFWLGYCNSAVNPMIYALFSKD 578
            .||.|:||.|..||.|||.:...|||     | .|:...:...|.||||.||.:||.|||.|::|
Zfish   375 ATLGIVVGAFTICWLPFFLLSTARPFICGTEC-SCIPLWVERTLLWLGYANSLINPFIYAFFNRD 438

  Fly   579 FRFAFKRIICRCFCSRQSVSLKSSRRGSDMSAIRIRARTPSITPS 623
            .|..::.::.   |..::::.:.|..|.. .|:|:..| |.:..|
Zfish   439 LRTTYRSLLS---CRYRNINRRLSAAGMH-EALRLVER-PEVVVS 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 55/125 (44%)
7tm_1 37..>181 CDD:278431 59/144 (41%)
htr7aXP_021323081.1 7tmA_5-HT7 105..443 CDD:320452 140/569 (25%)
TM helix 1 106..132 CDD:320452 8/25 (32%)
TM helix 2 139..165 CDD:320452 15/25 (60%)
TM helix 3 178..208 CDD:320452 16/29 (55%)
TM helix 4 220..242 CDD:320452 6/21 (29%)
TM helix 5 259..288 CDD:320452 16/28 (57%)
TM helix 6 368..398 CDD:320452 15/29 (52%)
TM helix 7 411..436 CDD:320452 12/24 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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