DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and htr7a

DIOPT Version :10

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_021328829.2 Gene:htr7a / 562111 ZFINID:ZDB-GENE-130530-666 Length:479 Species:Danio rerio


Alignment Length:630 Identity:154/630 - (24%)
Similarity:234/630 - (37%) Gaps:247/630 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NETECEDLIKSVKWTEPANLISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVAD 66
            |.|.|.:.|.|  :.|...::...||..:.::.|.||.||:.:|....|||..:|:.||:||:||
Zfish    88 NGTRCAEQILS--YGEVEKVLIGGVLTMLTLITICGNMLVVISVCFVKKLRQPSNYLIVSLALAD 150

  Fly    67 LLVGLAVLPF-SATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPS 130
            |.|.|||:|| |.|..:...||||..:|.:::|:||..|||||:.||.||:|||:.:|||:|||.
Zfish   151 LSVALAVMPFVSITDLIGGRWIFGKFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPV 215

  Fly   131 IMSTKKAKSLIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDS 195
            ..:......::..:|:||..|..|||.||                                    
Zfish   216 RQNGWCMAKMVLSVWLLSASITLPPLFGW------------------------------------ 244

  Fly   196 IKDQGEASLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTE 260
                                |.|..|.           |:                         
Zfish   245 --------------------AQNVNDD-----------RV------------------------- 253

  Fly   261 TEMDLDLLNAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAA-VR 324
                                      |.::.|.||.:||...:|||||.|||..|:||:||| :.
Zfish   254 --------------------------CLISQDFGYTIYSTAVAFYIPMTVMLVMYYRIFRAAKLS 292

  Fly   325 TTRAINQGFKTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLS 389
            ..:....||          .|.|::.:           ::|.:..:|..       |...|..: 
Zfish   293 AAKHTITGF----------PRVEQEEV-----------EEDEVEEDGGD-------GAEEPTGV- 328

  Fly   390 KYATRRLHHHDKIKISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYR 454
                      |.:.:::                                            :|.|
Zfish   329 ----------DCVTVAI--------------------------------------------KLQR 339

  Fly   455 QQQQHGVASSCYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRR-NIKAQVKRFRMETKAA 518
            :.::      |     ..||.:.|                   .:||| :.:..:..|:.|.|||
Zfish   340 EVEE------C-----ARLPRILR-------------------GVGRRCSDRRSISIFKREQKAA 374

  Fly   519 KTLAIIVGMFIFCWCPFFTMYIIRPF-----CQDCVDPLLFSVLFWLGYCNSAVNPMIYALFSKD 578
            .||.|:||.|..||.|||.:...|||     | .|:...:...|.||||.||.:||.|||.|::|
Zfish   375 ATLGIVVGAFTICWLPFFLLSTARPFICGTEC-SCIPLWVERTLLWLGYANSLINPFIYAFFNRD 438

  Fly   579 FRFAFKRIICRCFCSRQSVSLKSSRRGSDMSAIRIRARTPSITPS 623
            .|..::.::.   |..::::.:.|..|.. .|:|:..| |.:..|
Zfish   439 LRTTYRSLLS---CRYRNINRRLSAAGMH-EALRLVER-PEVVVS 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 140/569 (25%)
TM helix 1 22..48 CDD:320191 8/25 (32%)
TM helix 2 55..81 CDD:320191 16/26 (62%)
TM helix 3 93..123 CDD:320191 16/29 (55%)
TM helix 4 135..158 CDD:320191 7/22 (32%)
TM helix 5 292..321 CDD:320191 16/28 (57%)
TM helix 6 512..542 CDD:320191 15/29 (52%)
TM helix 7 551..576 CDD:320191 12/24 (50%)
htr7aXP_021328829.2 None

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