DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and adrb3a

DIOPT Version :10

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001121807.1 Gene:adrb3a / 558248 ZFINID:ZDB-GENE-080917-21 Length:413 Species:Danio rerio


Alignment Length:645 Identity:140/645 - (21%)
Similarity:217/645 - (33%) Gaps:273/645 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 INVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFSATWEVFKVWIFGDLWCR 94
            |..:.|.||.|||.|:..:::|::.||.||::||.|||::|:.|:|..||..|...|...:.:|.
Zfish     4 IITITIVGNLLVIIAIARTSQLQTTTNIFIMSLACADLIMGVLVVPLGATIVVTGQWKLNNTFCE 68

  Fly    95 IWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGIWVLSFFICFPPLVGW 159
            :|.:|||...||||..||.|::|||:|:|||:.:..:::..:|:.::..:|::|..|.|.|:   
Zfish    69 LWTSVDVLCVTASIETLCIIAVDRYIAITRPLRHKVLLNKCRARIIVCIVWIVSACISFIPI--- 130

  Fly   160 KDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSPPHIGNGNAYNPYDPGF 224
                             :|                                            ||
Zfish   131 -----------------MY--------------------------------------------GF 134

  Fly   225 APIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQNRPQTISGSCPWKCEL 289
            ...|.:.::..|....|                                        :|   |:.
Zfish   135 WRRDPNDDVATACYSDT----------------------------------------NC---CDF 156

  Fly   290 TNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTKGSKGIGSRFEEQRLTLR 354
            ..:..|.:.|::.|||||:|:|:|.|.|::..|.|..:.|::.          ..||:.:.:   
Zfish   157 ITNMTYAIISSVVSFYIPLFIMIFVYARVFLIATRQVQLIDKN----------RLRFQNEYM--- 208

  Fly   355 IHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLHHHDKIKISVSYPSSENISELAG 419
                 |:..|.....|.:..|....:|..:.:|.|                              
Zfish   209 -----GNQVQPPTIGNNNLPSMCNNVGGMTAKRKS------------------------------ 238

  Fly   420 HGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVASSCYLQVGKGLPELARRQSNTS 484
                                                                     :||     
Zfish   239 ---------------------------------------------------------SRR----- 241

  Fly   485 EAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKTLAIIVGMFIFCWCPFFTMYIIRPFCQDCV 549
                    ||:...:    ||        |.||.|||.||:|:|..||.|||...||..|...  
Zfish   242 --------RPSRLTV----IK--------EHKALKTLGIIMGVFTLCWLPFFVANIIYAFVPQ-- 284

  Fly   550 DPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRII--------------------CRCFCSR 594
            |...|.:|.||||.||.:||:||.. |.:||.|||.::                    |.||...
Zfish   285 DKYFFRLLNWLGYINSGLNPIIYCR-SPEFRTAFKNLLACPWIPSIKMNFLYKEFQIRCPCFLGS 348

  Fly   595 QSVSLKSS------------RRGSDMSAIRIRARTPSITPSAAAHSFGDESELHHSEMSN 642
            ....:..|            ..||..|:.|....:|. .|.:...:|..|.....:|.||
Zfish   349 AEPGMSGSFQKPPTSPDALPEDGSSQSSYRSEEPSPG-PPHSNGSTFFSEISEPETEFSN 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 122/552 (22%)
TM helix 1 22..48 CDD:320191 8/17 (47%)
TM helix 2 55..81 CDD:320191 14/25 (56%)
TM helix 3 93..123 CDD:320191 16/29 (55%)
TM helix 4 135..158 CDD:320191 6/22 (27%)
TM helix 5 292..321 CDD:320191 12/28 (43%)
TM helix 6 512..542 CDD:320191 16/29 (55%)
TM helix 7 551..576 CDD:320191 12/24 (50%)
adrb3aNP_001121807.1 7tm_GPCRs 11..317 CDD:475119 120/545 (22%)
TM helix 2 30..52 CDD:410628 11/21 (52%)
TM helix 3 68..90 CDD:410628 11/21 (52%)
TM helix 4 113..129 CDD:410628 4/15 (27%)
TM helix 5 160..183 CDD:410628 10/22 (45%)
TM helix 6 255..277 CDD:410628 12/21 (57%)
TM helix 7 286..311 CDD:410628 12/25 (48%)

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