DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and adra1ab

DIOPT Version :10

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_021334987.2 Gene:adra1ab / 557259 ZFINID:ZDB-GENE-060503-384 Length:431 Species:Danio rerio


Alignment Length:692 Identity:170/692 - (24%)
Similarity:239/692 - (34%) Gaps:298/692 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EDLIKSVKWTEP-ANLISLAVLEF--INVLVIG------------GNCLVIAAVFCSNKLRSVTN 56
            ||.|.|..:.|. :|..::..||.  ...||:|            ||.|||.:|.|...|||||:
Zfish     8 EDYINSTFFPENCSNCSTIPALEIDVTKTLVLGLVLVLFLIFGVMGNILVILSVACHRNLRSVTH 72

  Fly    57 FFIVNLAVADLLVGLAVLPFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVA 121
            :||.|||:||||:...||||||..|....|:||...|..|.|:||..||||||:||.||:||.:|
Zfish    73 YFIGNLAIADLLLSSVVLPFSAVSEALGRWVFGRHLCNAWTALDVLCCTASILSLCVISVDRCMA 137

  Fly   122 VTRPVTYPSIMSTKKAKSLIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSS 186
            |:.|:.|||..:.::|.:.:|.:|.||..|...||.||::                         
Zfish   138 VSYPLQYPSFATGRRAMTAVAALWALSAAISVGPLFGWRE------------------------- 177

  Fly   187 EDGQLGLDSIKDQGEASLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTT 251
                               |.|.                  |.|.                    
Zfish   178 -------------------PMPE------------------DESV-------------------- 185

  Fly   252 TASSSSTTETEMDLDLLNAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYW 316
                                               |.:..|.||.::||..|||:|:.|:|..|.
Zfish   186 -----------------------------------CRVNEDPGYAIFSAACSFYVPLAVILAMYC 215

  Fly   317 RIYRAAVRTTRAINQGFKTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLG 381
            |:|..|...|||:::. :.|.|       ..||.:|||||..:..|.                  
Zfish   216 RVYVVARHKTRAMSKS-RETNG-------LSEQGMTLRIHCRKAQND------------------ 254

  Fly   382 TPSPERLSKYATRRLHHHDKIKISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRE 446
                       ||:   .|.:::.                          |:.||.         
Zfish   255 -----------TRK---EDAMRLK--------------------------NSHFAF--------- 270

  Fly   447 STESQLYRQQQQHGVASSCYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRF 511
                                                                       .::.:|
Zfish   271 -----------------------------------------------------------MRLLKF 276

  Fly   512 RMETKAAKTLAIIVGMFIFCWCPFFTMYII-------RPFCQDCVDPLLFSVLFWLGYCNSAVNP 569
            ..|.||||||.|:||.|:.||.|||.:..|       ||  .|.|    |.:.|||||.||.:||
Zfish   277 SREKKAAKTLGIVVGCFVLCWLPFFLVLPISSIFPSHRP--PDAV----FKITFWLGYFNSCLNP 335

  Fly   570 MIYALFSKDFRFAFKRII-CRCFCSRQSVSLKSSRRGSDMSAIRIRARTPSITPSAAAHSFGDES 633
            :||..||::|:.||:.:: .||      :|..........:|.:...::|....|....|:..:.
Zfish   336 IIYPCFSQEFKKAFQNVLHGRC------LSRTHQTWSPPANATQYMPKSPQGLSSGFTDSWRSDH 394

  Fly   634 ELHHSEMSNDPRXRSFGPSSSSQSSLGGLRKTSLKVPVYEIC 675
            ....:.|.|:   .|:....:|         .||||....||
Zfish   395 ASSSAVMLNE---NSYDEPDTS---------LSLKVHQVSIC 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 145/582 (25%)
TM helix 1 22..48 CDD:320191 11/39 (28%)
TM helix 2 55..81 CDD:320191 16/25 (64%)
TM helix 3 93..123 CDD:320191 18/29 (62%)
TM helix 4 135..158 CDD:320191 8/22 (36%)
TM helix 5 292..321 CDD:320191 14/28 (50%)
TM helix 6 512..542 CDD:320191 17/36 (47%)
TM helix 7 551..576 CDD:320191 12/24 (50%)
adra1abXP_021334987.2 None

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