DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oamb and adra1bb

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001007359.1 Gene:adra1bb / 492486 ZFINID:ZDB-GENE-041114-51 Length:481 Species:Danio rerio


Alignment Length:686 Identity:189/686 - (27%)
Similarity:251/686 - (36%) Gaps:297/686 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNETECEDLIKSVKWTEPANLISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVA 65
            :|.|..|.|:.|  ...|..|    ||.|.....|.||.|||.:|.|:..|||.||:||||||:|
Zfish    34 LNGTGLEPLLLS--RAVPLGL----VLGFFITFAIAGNILVILSVVCNRHLRSPTNYFIVNLAIA 92

  Fly    66 DLLVGLAVLPFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPS 130
            |||:|..|||.|||.||...|:||.::|.:|.||||..|||||::||.||:|||:.|:.|:.||:
Zfish    93 DLLLGTTVLPVSATLEVVGHWVFGRIFCDVWAAVDVLCCTASIMSLCVISIDRYIGVSHPLQYPN 157

  Fly   131 IMSTKKAKSLIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDS 195
            |::.::|...:.|:||||..|...||:|||:                                  
Zfish   158 IVTGRRALLAMLGVWVLSLVISIGPLLGWKE---------------------------------- 188

  Fly   196 IKDQGEASLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTE 260
                     ||||                              |.|                   
Zfish   189 ---------PPSP------------------------------DDT------------------- 195

  Fly   261 TEMDLDLLNAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRT 325
                                     .|.:..:..|.|:|:|||||||:.|:|..|.|:|..|.||
Zfish   196 -------------------------VCAINEEPFYALFSSLGSFYIPLIVILVMYCRVYVVAKRT 235

  Fly   326 TRAINQGFKTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSK 390
            |:.:..|.||...:.|        .:|||||||                                
Zfish   236 TKNLEAGVKTESMNSG--------EITLRIHRG-------------------------------- 260

  Fly   391 YATRRLHHHDKIKISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQ 455
                                    |::  |.|.|..|..                          
Zfish   261 ------------------------SQV--HEDAGKSRAH-------------------------- 273

  Fly   456 QQQHGVASSCYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKT 520
                                                       ..|.::..::.:|..|.|||||
Zfish   274 -------------------------------------------QARNSLTVKLLKFSREKKAAKT 295

  Fly   521 LAIIVGMFIFCWCPFFTMYIIRPFCQDCVDP-LLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFK 584
            |.::||||..||.|||....|..|......| .:.|::|||||.||.:||:||..:|::|:.||.
Zfish   296 LGVVVGMFTLCWLPFFLTLPIVSFNTSLRPPETVSSIIFWLGYFNSCLNPIIYPCYSREFKLAFI 360

  Fly   585 RII-CRC--------------------FCSRQ----SVSLKSSRRGSDMSAIRIRART-PSITPS 623
            ||: |||                    |.|||    ||:..|...||.        || .|.:||
Zfish   361 RILKCRCRRRRRPGWRAYNYRGSQINSFYSRQDSRDSVNYGSYLNGSQ--------RTLSSSSPS 417

  Fly   624 AAAHSFGDESELHHSEMSNDPRXRSFGPSSSSQSSL 659
            .:.|:.|    |.|.:.......||..||..|:|.|
Zfish   418 PSYHTKG----LSHFQEDGPRLGRSRTPSVLSESIL 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 66/124 (53%)
7tm_1 37..>181 CDD:278431 69/143 (48%)
adra1bbNP_001007359.1 7tm_4 61..>228 CDD:304433 90/283 (32%)
7tm_1 64..348 CDD:278431 142/535 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 309 1.000 Inparanoid score I2599
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1095345at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.970

Return to query results.
Submit another query.