DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and 5-HT7

DIOPT Version :10

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_524599.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster


Alignment Length:246 Identity:51/246 - (20%)
Similarity:82/246 - (33%) Gaps:80/246 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VKEHVPEAPPAHPALIK-RTYKPSADSSQPGPS-------SAPDFYTTKILGKSPT-----RQNS 78
            :|..:.|...|.|::.. .|..|:..|.:.|.|       |.....|..|.|.|..     :||.
  Fly   334 IKSELLETANASPSVTTIGTNGPNVPSVRQGGSLTGGAGGSRGSGSTASITGSSSRGLNNGQQNG 398

  Fly    79 PSGSTPEQACKMAWQKMADKRKQEDLGG--PSKTKSHKP--QTTIKMKRK--------------- 124
            ..|:....|..........:::|:.|||  |:.|.|:.|  |.|.|.:::               
  Fly   399 ALGNGRGNALSSGSLAGQQQQQQQQLGGGVPAGTNSNGPPDQYTNKARQEVFVMQRIQELQKEGL 463

  Fly   125 --KKNLNNCTDMPE---------SEILATFADYRQE----------------------------- 149
              :|.|....:.|.         .|::...||:.||                             
  Fly   464 WTEKRLPKVQEPPRPKAHWDYLLEEMVWLAADFAQERKWKKAAARKCARMVQKHFQDKALAAQRA 528

  Fly   150 --LHEIFLKH-----KDELEEQWMANKELVDYTDVAHLFNEDQKMAMMQVL 193
              ..|:.||.     ..|::..|...::||:|.....| :|.:|.|:.|.|
  Fly   529 EKAQELQLKRIAAFVAKEIKTFWSNAEKLVEYKQQTKL-DERRKKALDQQL 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 51/246 (21%)
TM helix 1 22..48 CDD:320191 5/21 (24%)
TM helix 2 55..81 CDD:320191 9/37 (24%)
TM helix 3 93..123 CDD:320191 11/33 (33%)
TM helix 4 135..158 CDD:320191 9/67 (13%)
TM helix 5 292..321 CDD:320191
TM helix 6 512..542 CDD:320191
TM helix 7 551..576 CDD:320191
5-HT7NP_524599.1 7tmA_5-HT7 163..518 CDD:320452 37/183 (20%)
TM helix 1 164..190 CDD:320452
TM helix 2 197..223 CDD:320452
TM helix 3 235..265 CDD:320452
TM helix 4 277..299 CDD:320452
TM helix 5 319..348 CDD:320452 4/13 (31%)
TM helix 6 447..477 CDD:320452 2/29 (7%)
TM helix 7 486..511 CDD:320452 5/24 (21%)
Blue background indicates that the domain is not in the aligned region.

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