DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and 5-HT7

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001263131.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster


Alignment Length:585 Identity:157/585 - (26%)
Similarity:222/585 - (37%) Gaps:233/585 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LISLAVLEFINVLVIG---GNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFSATWEV 82
            |.|:.|...:.::::|   ||.||..||....|||...|:.:|:||::||.|.|.|:|.:..:||
  Fly   160 LTSIFVSIVLLIVILGTVVGNVLVCIAVCMVRKLRRPCNYLLVSLALSDLCVALLVMPMALLYEV 224

  Fly    83 FKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGI-WV 146
            .:.|.||.|.|.||::.||..||||||||||||:|||:|:|:|:.| .:..|.:...|..|| |:
  Fly   225 LEKWNFGPLLCDIWVSFDVLCCTASILNLCAISVDRYLAITKPLEY-GVKRTPRRMMLCVGIVWL 288

  Fly   147 LSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSPPHI 211
            .:..|..|||:       ::      ||.        ...|:||                     
  Fly   289 AAACISLPPLL-------IL------GNE--------HEDEEGQ--------------------- 311

  Fly   212 GNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQNRP 276
                          ||                                                 
  Fly   312 --------------PI------------------------------------------------- 313

  Fly   277 QTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTKGSKG 341
                      |.:..:..|.:|:.|||||||:.||||.|::|:|||.|..               
  Fly   314 ----------CTVCQNFAYQIYATLGSFYIPLSVMLFVYYQIFRAARRIV--------------- 353

  Fly   342 IGSRFEEQRLTLRIHR---GRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLHHHDKI- 402
                .||:|....:.:   |.||.........|.|:..::..|               ..|..: 
  Fly   354 ----LEEKRAQTHLQQALNGTGSPSAPQAPPLGHTELASSGNG---------------QRHSSVG 399

  Fly   403 KISVSYPSSENISE----LAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVAS 463
            ..|::|.:...:|.    |||||..|                                   ||:.
  Fly   400 NTSLTYSTCGGLSSGGGALAGHGSGG-----------------------------------GVSG 429

  Fly   464 SCYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRM--ETKAAKTLAIIVG 526
            |..|.                   ||.|    :||:          ||::  |.||:.||.||:.
  Fly   430 STGLL-------------------GSPH----HKKL----------RFQLAKEKKASTTLGIIMS 461

  Fly   527 MFIFCWCPFFTMYIIRPFCQDCVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRII-CRC 590
            .|..||.|||.:.:||||....|...|.|:..||||.||.:||:|||..::|||..|:.|: .||
  Fly   462 AFTVCWLPFFILALIRPFETMHVPASLSSLFLWLGYANSLLNPIIYATLNRDFRKPFQEILYFRC 526

  Fly   591  590
              Fly   527  526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 56/128 (44%)
7tm_1 37..>181 CDD:278431 60/144 (42%)
5-HT7NP_001263131.1 7tm_4 173..>342 CDD:304433 80/284 (28%)
7tm_1 179..507 CDD:278431 143/545 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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