DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and Octbeta1R

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001262843.1 Gene:Octbeta1R / 42652 FlyBaseID:FBgn0038980 Length:508 Species:Drosophila melanogaster


Alignment Length:681 Identity:161/681 - (23%)
Similarity:235/681 - (34%) Gaps:310/681 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ECEDLIKSVKWTEPANLISLAVLEFINVLVIG--------GNCLVIAAVFCSNKLRSVTNFFIVN 61
            :.:|:..|...|:.|:..|...|.|:...:||        ||.|||.:|....|||.:||:|:|:
  Fly    84 QAQDIQASEGSTDDADGSSHLALVFVKCFIIGFIILAAILGNMLVIVSVMRHRKLRIITNYFVVS 148

  Fly    62 LAVADLLVGLAVLPFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPV 126
            |||||:||.|..:.|:|:..:...|:||.:.|.:|.:.||:..||||::||.||:|||.|:.:|:
  Fly   149 LAVADMLVALCAMTFNASVMISGKWMFGSVMCDMWNSFDVYFSTASIMHLCCISVDRYYAIVQPL 213

  Fly   127 TYPSIMSTKKAKSLIAGIWVLSFFICFPPLV-GWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQ 190
            .||.||:.::...::..:|:....:.|.|:. ||                   ||||        
  Fly   214 DYPLIMTQRRVFIMLLMVWLSPALLSFLPICSGW-------------------YTTT-------- 251

  Fly   191 LGLDSIKDQGEASLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASS 255
               ::.|      ...|.|||                                            
  Fly   252 ---ENYK------YLKSNPHI-------------------------------------------- 263

  Fly   256 SSTTETEMDLDLLNAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYR 320
                                           ||...::.|.:.|:..||:||..|||..|:|||:
  Fly   264 -------------------------------CEFKVNKAYAIVSSSMSFWIPGIVMLSMYYRIYQ 297

  Fly   321 AAVRTTRAINQGFKTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSP 385
            .|.|                       ::||..|                               
  Fly   298 EADR-----------------------QERLVYR------------------------------- 308

  Fly   386 ERLSKYATRRLHHHDKIKISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTES 450
               ||.|...|..|  ::||                                             
  Fly   309 ---SKVAALLLEKH--LQIS--------------------------------------------- 323

  Fly   451 QLYRQQQQHGVASSCYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMET 515
                             |:.|..|.:...||.                         :...|.|.
  Fly   324 -----------------QIPKPRPSIQVEQST-------------------------ISTMRRER 346

  Fly   516 KAAKTLAIIVGMFIFCWCPFFTMYIIRPFCQDCVDP-LLFSVLFWLGYCNSAVNPMIYALFSKDF 579
            |||:||.||:..|:.||.|||..||:...|..|:.| ||..:|||:||.|||:||:|||.|::||
  Fly   347 KAARTLGIIMSAFLICWLPFFLWYIVSSLCDSCITPRLLVGILFWIGYFNSALNPIIYAYFNRDF 411

  Fly   580 RFAFKRII------CRCFCSR-----QSVSLK---SSRRGSD----------------------- 607
            |.|||:.:      ...||.|     ....|:   .||||::                       
  Fly   412 RAAFKKTLKSLFPYAFYFCRRGRGRDDDRDLEFGGPSRRGTNGAQRTGSGSAEMANCVNSTASSE 476

  Fly   608 --MSAIRIRARTPSITPSAAAHSFGDESELH 636
              ||.:|.|....::||:..|..    .:||
  Fly   477 IHMSVMRARQYAVNVTPTTDAQM----QQLH 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 51/132 (39%)
7tm_1 37..>181 CDD:278431 53/144 (37%)
Octbeta1RNP_001262843.1 7tm_4 112..>231 CDD:304433 49/118 (42%)
7tm_1 124..404 CDD:278431 125/536 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460617
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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