DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and Oct-TyrR

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001163494.1 Gene:Oct-TyrR / 42452 FlyBaseID:FBgn0004514 Length:601 Species:Drosophila melanogaster


Alignment Length:644 Identity:188/644 - (29%)
Similarity:252/644 - (39%) Gaps:191/644 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ECEDLIKSV------------KWTEPANLISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNF 57
            |||..::.:            :|..   |::..||..|.||.|.||.|||.:||....||.|.||
  Fly    85 ECEGAVEELHASILGLQLAVPEWEA---LLTALVLSVIIVLTIIGNILVILSVFTYKPLRIVQNF 146

  Fly    58 FIVNLAVADLLVGLAVLPFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAV 122
            |||:||||||.|.|.||||:..:.:...|.||...|::||..||..||:||||||||:||||.|:
  Fly   147 FIVSLAVADLTVALLVLPFNVAYSILGRWEFGIHLCKLWLTCDVLCCTSSILNLCAIALDRYWAI 211

  Fly   123 TRPVTYPSIMSTKKAKSLIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSE 187
            |.|:.|....:..:...||:|:|:||..|..|||:||.|.                         
  Fly   212 TDPINYAQKRTVGRVLLLISGVWLLSLLISSPPLIGWNDW------------------------- 251

  Fly   188 DGQLGLDSIKDQGEASLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTT 252
                                                                             
  Fly   252 ----------------------------------------------------------------- 251

  Fly   253 ASSSSTTETEMDLDLLNAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWR 317
                                   |...:.:.|  ||||:.||||:||:||||:||:.:|...|..
  Fly   252 -----------------------PDEFTSATP--CELTSQRGYVIYSSLGSFFIPLAIMTIVYIE 291

  Fly   318 IY-------RAAVRTTRAINQGFKTTK----------GSKGIGSRFEEQRLTLRIHRGRG----- 360
            |:       |...|..:......|:|:          .:...||:.......|...|.|.     
  Fly   292 IFVATRRRLRERARANKLNTIALKSTELEPMANSSPVAASNSGSKSRLLASWLCCGRDRAQFATP 356

  Fly   361 --SNQQDSMHS---NGSTQSTTTTLGTPSPER-----LSKYATRRLHHHDKIK------------ 403
              .|.|:|:.|   .....|.....|...|::     |.| .:||....|.||            
  Fly   357 MIQNDQESISSETHQPQDSSKAGPHGNSDPQQQHVVVLVK-KSRRAKTKDSIKHGKTRGGRKSQS 420

  Fly   404 ISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVASSCYLQ 468
            .|...|..|.....|| ||.|..:...|      |..|  |:...|..........|....|..|
  Fly   421 SSTCEPHGEQQLLPAG-GDGGSCQPGGG------HSGG--GKSDAEISTESGSDPKGCIQVCVTQ 476

  Fly   469 VGKGLP-ELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKR---FRMETKAAKTLAIIVGMFI 529
            ..:... :|...||:|..|..|  ..|..||....|...:.|:   ...|.:||:||.||:|:|:
  Fly   477 ADEQTSLKLTPPQSSTGVAAVS--VTPLQKKTSGVNQFIEEKQKISLSKERRAARTLGIIMGVFV 539

  Fly   530 FCWCPFFTMYIIRPFCQDCVDPLLF-SVLFWLGYCNSAVNPMIYALFSKDFRFAFKRII 587
            .||.|||.||:|.||||.|.....| :.:.||||.||.:||:||.:|:.|:|.||||::
  Fly   540 ICWLPFFLMYVILPFCQTCCPTNKFKNFITWLGYINSGLNPVIYTIFNLDYRRAFKRLL 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 64/124 (52%)
7tm_1 37..>181 CDD:278431 66/143 (46%)
Oct-TyrRNP_001163494.1 Zinc_peptidase_like <113..244 CDD:301362 66/130 (51%)
7tm_1 126..>293 CDD:278431 86/281 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460602
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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