DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oamb and TyrR

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001287381.1 Gene:TyrR / 42136 FlyBaseID:FBgn0038542 Length:631 Species:Drosophila melanogaster


Alignment Length:650 Identity:173/650 - (26%)
Similarity:260/650 - (40%) Gaps:207/650 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DLIKSVKWTEPANLISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLA 72
            ||:.|  |   ..:|.:||.....|:.:.||.|||.|:..:.:||::||.|:::|||||||||:.
  Fly   109 DLVLS--W---QGIILIAVFATFIVVTVIGNTLVILAILTTRRLRTITNCFVMSLAVADLLVGIF 168

  Fly    73 VLPFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKK- 136
            |:|.:....:...|..|.:.|.||:::||.:||||||:|||||:|||:|||||:||.....:|: 
  Fly   169 VMPPAVAVHLIGSWQLGWVLCDIWISLDVLLCTASILSLCAISVDRYLAVTRPLTYSRKRRSKRL 233

  Fly   137 AKSLIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGE 201
            |..:|..:|:|:..|..||::||                                          
  Fly   234 ALIMILIVWLLALAITCPPMLGW------------------------------------------ 256

  Fly   202 ASLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLD 266
                              |:||                                      ..||.
  Fly   257 ------------------YEPG--------------------------------------RRDLR 265

  Fly   267 LLNAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTR---- 327
                               :|....:.|||::||:|||:|||.||::.|.||  :.|..:|    
  Fly   266 -------------------ECRYNQNEGYVIFSAMGSFFIPMAVMIYVYARI--SCVIASRHDNM 309

  Fly   328 ----AINQGFKTTKGS------------KGIGSRFEEQRLTLRIHRGRGSNQ------QDSMHSN 370
                ..|:.||....:            ..:|.|  :::.|.|..    |||      ||.|.|:
  Fly   310 TDISVHNKKFKRYTAADVENELSEQEQHSSVGQR--QRQATSRTF----SNQTIAKELQDMMLSD 368

  Fly   371 --------------GSTQSTTTTLGTPSPERL-------------SKYATRRLHHHDKIKISVSY 408
                          |...:::.|.||.....|             :|.....|.....:| ..|.
  Fly   369 SDNCAAMGAGGAGGGGGGASSATGGTHCQSLLALPSGGVGGSMGCAKNGCYELTRPSSLK-RAST 432

  Fly   409 PSSENISELAGHGDVGHERRQSGNALFAVHYN----GTNGRESTES-----QLYRQQQQHGVASS 464
            .|:...:..:|.|        .|::|....:.    |..|:..|.|     :.:..:..||....
  Fly   433 ASTTITTMTSGMG--------PGSSLLDAQWQSQPPGQTGQVQTHSLSQPPRTHSFRHSHGERDR 489

  Fly   465 CYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKTLAIIVGMFI 529
            ..|:.....|....:...|:.:.....|...|.|    ::..::...:.|.|..:||:|:||.||
  Fly   490 ERLRSHHHHPHYHHQAGVTTTSTSGNTSANTNSK----SLSNRITSLKKENKTTQTLSIVVGGFI 550

  Fly   530 FCWCPFFTMYIIRPF-CQDCVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRIICRCFCS 593
            .||.|||..|:|.|| .:.....:|...|.|||:.|||:||.|||.:|.|||.||.|:.|:.|.|
  Fly   551 ACWLPFFINYLITPFLAEHQASQMLAKALTWLGWFNSAINPFIYAFYSVDFRAAFWRLTCKRFFS 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 57/125 (46%)
7tm_1 37..>181 CDD:278431 60/144 (42%)
TyrRNP_001287381.1 7tm_4 127..>249 CDD:304433 56/121 (46%)
7tm_1 133..>298 CDD:278431 80/281 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460624
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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