DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and TyrRII

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001262682.1 Gene:TyrRII / 42135 FlyBaseID:FBgn0038541 Length:586 Species:Drosophila melanogaster


Alignment Length:655 Identity:159/655 - (24%)
Similarity:248/655 - (37%) Gaps:219/655 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SVKWTEPANLISLAVLEFINVLVIG--GNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVL 74
            |:.|.:     ||||..|:.::::.  ||.|||.||..:.:||:|||.|::|||:.|.|||..|:
  Fly    69 SMAWPK-----SLAVAVFLVIILVTVVGNTLVILAVLTTRRLRTVTNCFVMNLAITDWLVGTCVM 128

  Fly    75 PFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKK-AK 138
            |.|....:...|.||.:.|.||:::|:.:|:.|||:|||||||||:|||:|:||.....:|: |.
  Fly   129 PPSVVLYITGTWRFGWILCDIWISLDILLCSGSILSLCAISLDRYLAVTQPLTYSKKRRSKRLAL 193

  Fly   139 SLIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEAS 203
            .:|..:|:.:..|..||.:||          |..|.|                            
  Fly   194 LMILVVWITALSITCPPYLGW----------YEVGRH---------------------------- 220

  Fly   204 LPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLL 268
                                      .||.    :|                             
  Fly   221 --------------------------QAEF----VD----------------------------- 226

  Fly   269 NAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRI-YRAAVRTTRAINQG 332
                              |....::|||::||:|||:||:.|||:.|.:| |....|..|.:...
  Fly   227 ------------------CRYNQNKGYVVFSAMGSFFIPLTVMLYVYVKIGYVLTSRRQRIVRDA 273

  Fly   333 FKTTKGSKGI-GSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPS---PERLSKYAT 393
            :........: |..|              .::.:..|.            ||:   |.|.|::..
  Fly   274 YSERTADYDVDGDNF--------------ISESEHYHC------------TPTKWLPNRKSRWRF 312

  Fly   394 RRLH--------------HHDKIKIS-VSYPSSENISELAG-------------HGDVGHERRQS 430
            ..||              |...:|.| .|..||...:..||             |....:|..:.
  Fly   313 NSLHDPPPSAATNAAAKGHQSSVKCSKCSKCSSATGTAGAGAGAGVVDKTLTFKHQPTFYELVEV 377

  Fly   431 GNALFAVHYNGTNGR------ESTESQLYRQQQQHGVASSCY-----------------LQVGKG 472
            ......:|.:..:.:      .||.|.::....:...:.:|.                 |:..:.
  Fly   378 SRLSSLIHCSAISCKYGGPCMHSTPSGMHYVGTEASFSDTCLGGNVSNNTTTTTTNTVALETNEK 442

  Fly   473 LPELARRQSNTSEAGGSGHSRPANKKMG----------RRNIKAQVKRFRMETKAAKTLAIIVGM 527
            | |...:|....:.....|..|.....|          ...:..:|...:.::|.||||.|::|.
  Fly   443 L-EAEAKQKQQQQRSSFDHHHPHAHHHGSHGQQSHHNHHHRMPMRVSTTKRDSKTAKTLTIVMGG 506

  Fly   528 FIFCWCPFFTMYIIRPFC--QDCVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRIICRC 590
            .|.||.|||..|::.||.  ...::.|:|. ..|:|:.|.|:||.|||.::.|||.||.|:.||.
  Fly   507 LIACWLPFFVYYLLIPFLPRPAVLEDLMFG-FTWIGWVNCAINPFIYAFYNPDFRTAFWRLTCRP 570

  Fly   591 FCSRQ 595
            .|.::
  Fly   571 ICKQK 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 55/127 (43%)
7tm_1 37..>181 CDD:278431 61/144 (42%)
TyrRIINP_001262682.1 7tm_4 82..>212 CDD:304433 56/129 (43%)
7tm_1 91..>277 CDD:278431 83/300 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460623
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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