DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and Dop1R1

DIOPT Version :10

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001262563.1 Gene:Dop1R1 / 41726 FlyBaseID:FBgn0011582 Length:560 Species:Drosophila melanogaster


Alignment Length:133 Identity:31/133 - (23%)
Similarity:50/133 - (37%) Gaps:30/133 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 PEQACKM----AWQKMADKRKQEDLGGPSKTKSHKPQTTIKMKRKKKN-LNNCTDMPESEILATF 143
            |.|||:.    .|.:::|.|.       |..|.:..|.||.....|.. :.||  :.:..:|..|
  Fly   152 PAQACESFAGEIWNRLSDIRN-------SSNKLYGFQATINYFLLKLGFIVNC--ILQMVLLKHF 207

  Fly   144 ADYRQELHEIFLKHKDELEEQWMANKE--------LVDYTDVAHLFNEDQK-----MAMMQVLEN 195
            .|........|  |...:|.:..|.||        |.|: .|.:|..:.|.     |.:..::|.
  Fly   208 LDVDDYFWGFF--HLWNVEFKGTAEKEDSIFPRIVLCDF-KVRNLGQQHQHTVSCIMILNMIIEK 269

  Fly   196 EFV 198
            .::
  Fly   270 LYI 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 31/133 (23%)
TM helix 1 22..48 CDD:320191
TM helix 2 55..81 CDD:320191
TM helix 3 93..123 CDD:320191 7/29 (24%)
TM helix 4 135..158 CDD:320191 4/22 (18%)
TM helix 5 292..321 CDD:320191
TM helix 6 512..542 CDD:320191
TM helix 7 551..576 CDD:320191
Dop1R1NP_001262563.1 7tmA_Ap5-HTB1-like 130..442 CDD:320193 31/133 (23%)
TM helix 1 130..156 CDD:320193 2/3 (67%)
TM helix 2 163..189 CDD:320193 8/32 (25%)
TM helix 3 201..231 CDD:320193 7/31 (23%)
TM helix 4 243..265 CDD:320193 5/22 (23%)
TM helix 5 292..321 CDD:320193
TM helix 6 371..401 CDD:320193
TM helix 7 410..435 CDD:320193
Blue background indicates that the domain is not in the aligned region.

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