DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and mAChR-B

DIOPT Version :10

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_649764.1 Gene:mAChR-B / 40955 FlyBaseID:FBgn0037546 Length:1019 Species:Drosophila melanogaster


Alignment Length:914 Identity:157/914 - (17%)
Similarity:263/914 - (28%) Gaps:404/914 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFSATWEVFKVWIFGDLWCRIW 96
            :|.:|||.||:.|......:|..:|:||.:||..|:|:|...:||...:.:...|..|.:.|.:|
  Fly   145 ILTVGGNILVLLAFIVDRNIRQPSNYFIASLAATDMLIGTVSMPFYTIYVLKGYWDLGPMLCDLW 209

  Fly    97 LAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGIWVLSFFICFPPLVGWK- 160
            |:||..:|..|...:..|::|||.:|.....|.|..:..:...::...|::...:.|..:.||: 
  Fly   210 LSVDYTVCLVSQYTVLLITIDRYCSVKIAAKYRSWRTRTRVIYMVTITWIIPALLFFISIFGWEH 274

  Fly   161 ---------DQKAVIQPTYPKGNHTL---YYTTTM------------------SSSEDGQLGLDS 195
                     .|.||.....|..|..|   ||.||:                  ..||..|..:.|
  Fly   275 FTGKRDLLPGQCAVQFLKDPIFNTALIIGYYWTTLIVLFVLYAGIYKTAYDMQKRSEAKQRKMQS 339

  Fly   196 IKDQGEASLPPSPPHI------------------------------------GNGNAYNPY---- 220
            :......::.....|.                                    |:|.| ||.    
  Fly   340 MVALSAGAMSGMAGHAAGIGVIEEKILKTKVELAGDQTDLDSACTTVIKRLSGSGQA-NPLAVAT 403

  Fly   221 -----------DPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQN 274
                       ....|.|...|:.|.||:|:..:..:::....:...|:......|.........
  Fly   404 EEVEKMTPEQRRASAAKIQEEAKKREAAVDAEKSERSSSPAFDSDEESSVNQAQQLITQQKLNNM 468

  Fly   275 RPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTKGS 339
            |.::..|              :::.|                   :||:..||......|:|..|
  Fly   469 RKRSSIG--------------LVFGA-------------------QAALLATRGKGNLQKSTTNS 500

  Fly   340 KGI--------------------GSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPS 384
            |.|                    .::.:|:..:|..|:    |||...|.:...|....   ...
  Fly   501 KSIEAMHQYHHHQQHHHNQSPLQRAQSKEEMRSLHHHQ----NQQQPHHQHHQNQPNPP---LDR 558

  Fly   385 PERLSKYATRRLHHHDKIKISVSYP----------SSENISELAGHGDVGHE------------- 426
            |:|.|.....::..||:: :.:|.|          |..:::.:....|..|:             
  Fly   559 PKRTSCSTLSQIAEHDRL-VDLSAPPTLLNTSDPLSPVDLAPIEVPSDQVHQGLVQTILPPPDAF 622

  Fly   427 ---------------RRQSGNALFAVHY-----------------------NGTNG--------- 444
                           ...|||:..|:.|                       |.|..         
  Fly   623 QCPTPLSDDYSDRPFGNSSGNSELALTYDLMTNSELRYMDESSAMLASVTANSTTSPNDSVQGKP 687

  Fly   445 ----------RESTESQL-------------------------YRQQQQHGVASS---------- 464
                      |...:|.|                         :.|.|...:..:          
  Fly   688 PVLPPPPPARRNPPKSNLNQSLSQTPSQNQSPSQSLSLNLNPNHNQSQSQSIEEAVAIEKRLLVS 752

  Fly   465 -------------------CYLQV-GK-------------------------------------- 471
                               |.|.| ||                                      
  Fly   753 YTGIEDFAKVRRESCIEAICLLDVPGKLAADCPHRRASSPMETSSKDAILYSPMPPMPLSPKVKT 817

  Fly   472 -----GLPELA-------------RRQ----------------SNTSEAGGSGH----------- 491
                 |.|:.|             .|:                |:|...||.|.           
  Fly   818 STPQTGTPQSAAGVTPPVPLERIEERETSDSNTNKMPSTSGTTSSTGGVGGGGEQDGVGATKKNA 882

  Fly   492 --------------SRPANKKM----------------------GRRNIKAQVKRFRMETKAAKT 520
                          ||.::|:.                      ||:..|:: .|.|   ||.:|
  Fly   883 GDDDANREEKSLAASRNSSKRAFIHSIGKHFKSKKALPLILGVGGRQKSKSE-NRAR---KAFRT 943

  Fly   521 LAIIVGMFIFCWCPFFTMYIIRPFCQ--DCVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAF 583
            ::.|:|.|:.||.|:..:.::..||:  .|::..|:...::|.|.||.:||..|||.::.|:..|
  Fly   944 ISFILGCFVACWTPYHVLALVEGFCRHPPCINEHLYMFSYFLCYANSPMNPFCYALANQQFKKTF 1008

  Fly   584 KRII 587
            .||:
  Fly  1009 TRIL 1012

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 154/908 (17%)
TM helix 1 22..48 CDD:320191 7/15 (47%)
TM helix 2 55..81 CDD:320191 10/25 (40%)
TM helix 3 93..123 CDD:320191 11/29 (38%)
TM helix 4 135..158 CDD:320191 2/22 (9%)
TM helix 5 292..321 CDD:320191 1/28 (4%)
TM helix 6 512..542 CDD:320191 10/29 (34%)
TM helix 7 551..576 CDD:320191 10/24 (42%)
mAChR-BNP_649764.1 7tmA_mAChR_GAR-2-like 147..>323 CDD:320429 47/175 (27%)
TM helix 2 168..194 CDD:320429 10/25 (40%)
TM helix 3 206..236 CDD:320429 11/29 (38%)
TM helix 4 248..271 CDD:320429 2/22 (9%)
TM helix 5 293..322 CDD:320429 7/28 (25%)
7tm_GPCRs <932..1008 CDD:475119 26/79 (33%)
TM helix 6 941..963 CDD:410628 7/21 (33%)
TM helix 7 976..1001 CDD:410628 10/24 (42%)

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