DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and Octbeta3R

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster


Alignment Length:1126 Identity:205/1126 - (18%)
Similarity:322/1126 - (28%) Gaps:552/1126 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NETECEDLIKSVKWTEPANLISLAVLE---FINVLV--IGGNCLVIAAVFCSNKLRSVTNFFIVN 61
            |:.|.|:     .|.:    :||.:|:   |.::::  :.||.|||.:|..:.|||.:||:|:|:
  Fly   125 NQAELEE-----SWLD----LSLLLLKGFIFSSIILAAVLGNALVIISVQRNRKLRVITNYFVVS 180

  Fly    62 LAVADLLVGLAVLPFSATWEVF-KVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRP 125
            ||:||:||.|..:.|:|:.|:. ..|:||...|.::.::||:..|||||:||.||:|||.|:.||
  Fly   181 LAMADMLVALCAMTFNASVELSGGKWMFGPFMCNVYNSLDVYFSTASILHLCCISVDRYYAIVRP 245

  Fly   126 VTYPSIMSTKKAKSLIAGIWVLSFFICFPPL-VGW------------------------------ 159
            :.||..|:.|....::|.:|:|...|.|.|: :||                              
  Fly   246 LEYPLNMTHKTVCFMLANVWILPALISFTPIFLGWYTTEEHLREISLHPDQCSFVVNKAYALISS 310

  Fly   160 -----------------------KDQKAVI-----------------QPT-----YP-------- 171
                                   :.:||:.                 |||     :|        
  Fly   311 SVSFWIPGIVMLVMYWRIFKEAIRQRKALSRTSSNILLNSVHMGHTQQPTSLSYLHPSDCDLNAT 375

  Fly   172 ---KGNHTL------------------------------------------------YYTTTMSS 185
               :..|:.                                                |...|.:.
  Fly   376 SAREETHSALSNLEDMLQPATDEDDDRDECDELRVPSPPPRRLSRSSIDLRDLEQERYEKVTHTD 440

  Fly   186 SEDGQLGLDSIKDQGEASLPPSP---PHI------------------------------GNGNA- 216
            |....:.|...:.......||:|   |.|                              |:||: 
  Fly   441 SAPSMMALQQQQPSHNQLQPPAPVFNPQIWTEGKMIPSKELDKEHSHPNGPQQQLSLTSGSGNSE 505

  Fly   217 ------------------------YNPYDP-----------------------GFAPIDGSAEIR 234
                                    |:.:.|                       |...|.|....:
  Fly   506 PEPESTAYRVFGGLNSDESEGNDLYDTHLPLAEDNKELKRLIEDNYLYFKRQTGGTIISGPGGGK 570

  Fly   235 IAAIDST-----------------STSTTATTTTTASSSSTTETEMD--------LDLLNAPPQN 274
            .||:..|                 ::|.:....|.:.|.:..|..:.        |.||:...::
  Fly   571 YAALSETDFIRLKAGAAACGRKAFASSDSEFLRTISESRALPEQPVPGKEKGFNILSLLSKTKRS 635

  Fly   275 -------------------------------------------------RPQTISGSCPWKCELT 290
                                                             |..:.:.|.|.|.::.
  Fly   636 STECFTLEKKRHQANSEGSSFFRRSRNRKLSHSYNGCGGGKERKLERRQRQHSDTDSTPNKPDIL 700

  Fly   291 NDRGYVLYSALGSFYIPMF---VMLFFYWRIYRAAVR---------------------------- 324
            .|.. ||....|:..|..|   |.|..:..:.....|                            
  Fly   701 LDIN-VLSEQSGASVIQQFSDGVQLIDFSELKTPPERIRSDDELAQLADCFGESPQQPATPPPSL 764

  Fly   325 --------------TTRAINQGFKTTKGSKGIGSRFEEQRLTL-------------------RIH 356
                          ::..:.:.|::.....|..:...::..||                   .|.
  Fly   765 SPPELPEPSGLLIASSSELAEIFRSLSFPLGRPAGAPQRLSTLSDQVCANYLMSPPNTPAPPAIS 829

  Fly   357 RGRGSNQQDSMHSN--------------------GSTQSTTTTLG-------------------- 381
            ...|.....|..||                    |.|.|.|:|:.                    
  Fly   830 VPNGGAMDSSASSNAQSASINVYFLSPPPHAAAPGYTPSDTSTVSLDVVTSLPMPVPVPQPNPQM 894

  Fly   382 ------TPSPE-----RLSKYATRRLHHHD------KIKISVSYPSSENISELAGHGDVGHERRQ 429
                  :|.||     .||........|.|      |.|.|.. .:..::|...|.|.||....:
  Fly   895 ASQSNISPKPEIILDSTLSPVEGCGDEHRDVTSPLFKRKDSAG-DADVSVSGNGGAGGVGGVGGR 958

  Fly   430 SGNALFAVHYNGTN--------------------------------GREST---------ESQLY 453
            .|.......|:|..                                ||.||         :|.|.
  Fly   959 QGRCSILAGYDGIQTVRKRQASVVTYDVNVINFSQENSDSRSYIPMGRVSTSSAKHEFSNKSSLI 1023

  Fly   454 R----------------QQQQHG------------------------------------------ 460
            |                :|:..|                                          
  Fly  1024 RRGGICIFVDEEEAEIIEQRPRGITFAAVPSPLPKCPLCGADISSTTGTTANATATANADSTIDT 1088

  Fly   461 -VASSCYLQVGKGLPELARRQSNTSEAGGSGHSRPA-------NKKMGRRNIKA----------- 506
             |.:|....:.:..|:|.:|.:::|.:....|.|.|       ..|..:|..|.           
  Fly  1089 TVTTSSKRSIHEQTPDLGQRPASSSSSTRFWHKRTAAVTACWQQSKNRKRRFKTGCSHCGATGGS 1153

  Fly   507 --QVKRFRMETKAAKTLAIIVGMFIFCWCPFFTMYIIRPFCQ---DCVDPLLFSVLFWLGYCNSA 566
              ..|.::.|.|||:||.||:|:|:.||.|||..|:|...|.   .|.| :|..||||:||.||.
  Fly  1154 VRPAKGWKAEHKAARTLGIIMGVFLLCWLPFFLWYVITSLCGPACPCPD-VLVVVLFWIGYFNST 1217

  Fly   567 VNPMIYALFSKDFRFAFKRII 587
            :||:|||.|::|||.||:..:
  Fly  1218 LNPLIYAYFNRDFREAFRNTL 1238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 53/127 (42%)
7tm_1 37..>181 CDD:278431 64/279 (23%)
Octbeta3RNP_001034048.2 7tm_4 146..>346 CDD:304433 59/199 (30%)
7tm_1 156..>344 CDD:278431 58/187 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460618
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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